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SCNpilot_cont_300_bf_scaffold_1251_curated_13

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 9603..10655

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 324.0
  • Bit_score: 567
  • Evalue 3.80e-159
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 324.0
  • Bit_score: 567
  • Evalue 1.70e-158
tRNA-dihydrouridine synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHB9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 324.0
  • Bit_score: 567
  • Evalue 1.20e-158

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGACGCAACAGACTGATAAAAAAGAAAGAACGAGGTATTTTAAGCCTCCGATCTTCGCTGTGGCGCCGATGATGGATTGGACCGATCGGCATTGCCGGGTATTCCATCGTCTGCTGACGCGCAACGCGCTGCTCTATACGGAGATGCTGACCACCGGAGCGATCATTCACGGCGCGCGGGAACGCTTGCTGGGGTTCAGCGATGTCGAACATCCGGTCGCGCTGCAGCTTGGCGGATCGCGCGCAGAGGATCTCGCGGTGTCCGCGCGCATCGGCGAGGATTTCGGCTACGACGAAATCAATCTGAACGTCGGCTGTCCGTCCGACAGGGTGAAGGACGGGCGGTTCGGTGCCTGCCTGATGGCTGAGCCGGATCTGATTGCCGAAGGTGTCCACGCTATGAAGCGCGCGGTGTCCGTTCCGGTCACCGTGAAGTGCAGAATAGGAATCGATGACCAAGATATTGAGGCCAGCCTCGATACCTTCGTGCGCAAGATCACGGCCGCTGGAGTCGACGCCCTCATCGTTCACGCACGCAAGGCGTGGCTTGAAGGACTGTCCCCGAAGGAAAACCGGGATATTCCGCCGCTCGATTACGATAGAGTCTATCGGTTGAAGGCATCGCAGCGCGACATGCCGGTCATCATCAACGGCGGAATCGGCGGACTTTCAGAAGCGAAACAACATCTGGCGCATGTCGACGGCGTCATGCTGGGCCGCGCCGCCTATCAGGAGCCATGGCGTCTGCTGAAGGTCGATCCCGAACTGTTCGGCGAGGCGGCGGCGCACACCACCATGAAGCGCGCGTTAGAGGCCATGATGCCTTACATCGAGGATCAACTGGCAGGCGGCGTGCGATTGCATTCCATCACCCGGCATTTTGTCGGCGCCTTTCATGGCGTGCCGGGCGCACGGGCATTTCGGCGCCATCTCGCCGAGAACGGCGTGAAGGATGGCGCCGGCCTCGACGTGCTGCGCGAGGCCATTGCGCTGGTGGACGAGCCTTGCACTTATTCCGCATCGATAACTGACGAGAAATCCGAGTACGCGTAG
PROTEIN sequence
Length: 351
MTQQTDKKERTRYFKPPIFAVAPMMDWTDRHCRVFHRLLTRNALLYTEMLTTGAIIHGARERLLGFSDVEHPVALQLGGSRAEDLAVSARIGEDFGYDEINLNVGCPSDRVKDGRFGACLMAEPDLIAEGVHAMKRAVSVPVTVKCRIGIDDQDIEASLDTFVRKITAAGVDALIVHARKAWLEGLSPKENRDIPPLDYDRVYRLKASQRDMPVIINGGIGGLSEAKQHLAHVDGVMLGRAAYQEPWRLLKVDPELFGEAAAHTTMKRALEAMMPYIEDQLAGGVRLHSITRHFVGAFHGVPGARAFRRHLAENGVKDGAGLDVLREAIALVDEPCTYSASITDEKSEYA*