ggKbase home page

SCNpilot_cont_300_bf_scaffold_2689_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 2..2440

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 812.0
  • Bit_score: 1553
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 812.0
  • Bit_score: 1549
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVQ8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 812.0
  • Bit_score: 1553
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2439
TCGTTCGACATCATCAACAAGCTGATGACCAAGCGGGAAATCTCCGGCGTGATCGATCAGGTCTATCGCCACTGCGGTCAGAAGGAGACCGTGATCTTCTGCGACCGGATCATGGCGCTCGGCTTCTACAACGCGTTCAAGGCCGGCATCTCGTTCGGCAAGGACGACATGGTCGTTCCGCACGGGAAGTGGAAGATCGTCGACACCACGCGCACGCTGGCGAAGGACTTCGAGCAGCAGTACAACGATGGCCTGATCACCCATGGCGAGAAGTACAACAAGGTCGTCGACGCCTGGTCGAAGGCGACGGAAGAAATCGCCAAGGAGATGATGAAGGAGATTTCGTCGGTCAAGAAAAGCTCCAAGGGCGTCGAGGCGCAGATCAACTCGATCTACATGATGGCGCATTCGGGCGCGCGCGGTTCGCCGGCCCAGATGCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCATCTCGAACTTCAAGGAAGGGCTGTCGGTTCTCGAATACTTCAACTCGACCCACGGCGCCCGCAAGGGTCTCGCTGACACCGCGTTGAAGACCGCGAACTCGGGCTACCTGACGCGCCGTCTGGTCGACGTCGCGCAGGACTGCATCATCACGCAGGACGACTGCGGCACCAAGCTCGGCATCAAGATGCGCGCCATCGTCGACGCCGGCACGGTGGTGGCGTCGCTCGGGTCGCGCATCCTGGGACGCACGGCGTGCGAGGACATTCGCGATCCCGCGAGCAACAAGGTGCTGGTCAAGCGCAACACCTTGATGGAGGAAAGCCATGTCGACCAGATCTCAAAGGCCGGCATCCAGGAGGTCAAGATCCGCTCGGCGCTGACCTGCGAACTGGTCAACGGCATCTGCGGCAAGTGCTACGGCCGCGATCTGGCCCGCGGCACTCCGGTCAATCACGGCGAGGCGGTCGGCGTCATCGCGGCGCAGTCGATCGGCGAGCCCGGCACGCAGCTCACGATGCGCACGTTCCACATCGGCGGCGCGGCGCAGATCAACGAGCAGTCGGTGATCGAGTCGAACTTCGACGGCAAGATCACGATCAGGAACAGGGCGATCGCAAGAAACGGCGAAGGCCATCTGGTCGCGATGGTGCGCAACATGGTTGTCGCGGTCGTCGACGCGGACGGCACGGAGCGTGCGACGCACCGCATCCAGTACGGCGCGCGCATGCATGTCGACGAGGGCGATCAGGTCAAGCGCGGCCAGCGGATCGCCGAGTGGGATCCCTACACCCGGCCGGTTCTGACCGAGGTGGAGGGCACCATCGGATTCGAAGACCTGATCGAAGGTCAGTCGATCTCCGAAACGCTCGACGAATCCACCGGTATCGCCAAGCGCATCGTCATCGACTGGCGCGGCACGCGCGGCGGAGCGGATCTGCGCCCGGCCATCGTGATCAAGGGCAAGGACGGCAAGGTGCTGAAGCTCGCACGTGGCGGCGATGCCCGCTACATGCTGTCGGTCGACGCCATTCTGTCGGTCGACGTCGGAGCCAAGGTGAAGCCGGGCGACATTCTTGCGCGTATCTCGACCGAGAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGGGTGGCCGAACTGTTCGAGGCCCGCAGGCCGAAGGACGCGGCCATCATCGCTGAAATCGCCGGCACCATCCGATTCGGCCGCGACTACAAGAACAAGCGCCGCATCTCCATCGAACCGGTCGACAAGGAAGAGGAGGCTCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACATCGTCGAGAAGGGTGACTTCATCGTCGAGGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCATCGAGGAGCTCGCTGCCTATCTGGTCAACGAAATCCAGGAAGTCTACCGGTTGCAGGGCGTGCTCATCAACGACAAGCACATCGAGGTGATTGTCCGTCAGATGCTCCAGAAGGTCGAGATTACCGATCAGGGCGAGACCGACATGATCTCGGGCGAGCAGATCGACAAGATCGAGTTCGACCGGCTCAACGCCAAGGCGAGGGAAGAGGGCAAGAAGGTCGCGACGGGATCGCCCGTCCTTCTCGGCATCACCAAGGCGAGCCTGCAGACCCGCTCGTTCTTCTCGGCGGCGTCGTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCCGTCAACGGCAAGGTGGACCCACTCGAAGGCCTCAAGGAAAACGTCATCGTCGGCCGGCTGATCCCGGCAGGCACCGGCGCCTCGATGGCCAAGATTCGCGAGGTCGCGGTCAAGCGCGACAAGCTGATTCTCGACGAGCGCGAGAAGCAGGCCGCGATCGTGCCGTCCGCTCCGGAAGCCGAACCGCTGGCGCTTCCACCGGTGGAGTAG
PROTEIN sequence
Length: 813
SFDIINKLMTKREISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHGKWKIVDTTRTLAKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKEMMKEISSVKKSSKGVEAQINSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIVDAGTVVASLGSRILGRTACEDIRDPASNKVLVKRNTLMEESHVDQISKAGIQEVKIRSALTCELVNGICGKCYGRDLARGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSVIESNFDGKITIRNRAIARNGEGHLVAMVRNMVVAVVDADGTERATHRIQYGARMHVDEGDQVKRGQRIAEWDPYTRPVLTEVEGTIGFEDLIEGQSISETLDESTGIAKRIVIDWRGTRGGADLRPAIVIKGKDGKVLKLARGGDARYMLSVDAILSVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARRPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKEEEAREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDRLNAKAREEGKKVATGSPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKLILDEREKQAAIVPSAPEAEPLALPPVE*