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SCNpilot_cont_300_bf_scaffold_4635_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(3..239)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 77.0
  • Bit_score: 136
  • Evalue 2.80e-30
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 77.0
  • Bit_score: 136
  • Evalue 1.30e-29
Transcription-repair-coupling factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLP6_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 77.0
  • Bit_score: 136
  • Evalue 9.00e-30

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGAAGACGACCGCACGATCGCCGGCGGACTCGCTGTCGGCCGGCCGCCCGCTGACGCTCGCCAATGTCGCGGAAGGCGCGGAGGGGCTTGTCGCCTCGGATCTCGCACGCGCCATCAAGGCCAAGGCAGGACGGCAGGCTTCGGCCGTCAGCCTCGCCGTTGTCTGCCGGGACGGTCCGCGCATGCAGCAACTGGCGCGCGCGCTGGAATTCTTCGCGCCCGATATTTCGGTGATG
PROTEIN sequence
Length: 79
MKTTARSPADSLSAGRPLTLANVAEGAEGLVASDLARAIKAKAGRQASAVSLAVVCRDGPRMQQLARALEFFAPDISVM