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SCNpilot_cont_300_bf_scaffold_7726_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(2..1219)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 406.0
  • Bit_score: 785
  • Evalue 3.50e-224
Transcription termination factor Rho n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRY8_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 406.0
  • Bit_score: 785
  • Evalue 2.50e-224
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 406.0
  • Bit_score: 785
  • Evalue 7.80e-225

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCGGGAAATGAAACTTCAAGACCTCAAGGCCAAGACGCCAGCCGAACTCGTCTCGTTTGCGGAAGAGCTTGGGGTCGAAAATGCCAGCACCATGCGCAAGCAGGAGCTGATGTTCGCCATTCTCAAGCAACTGGCGATTCAGGAAATCGATATCATCGGCGAAGGCGTGGTCGAGGTTCTTTCCGACGGCTTCGGTTTTCTGCGCTCGCCGGACGCTAACTATCTGCCGGGTCCAGACGATATCTACGTCTCGCCGTCGCAGATCCGCCGCTTCGGCCTGCGAACTGGGGACACCATCGAAGGCCACATCCGCAGCCCGAAGGAAGGCGAGCGTTATTTCGCGCTGTTGAAGGTCAACACGCTCAATTTCGAGGACCCCGAGAAATCGAAGCACAAGGTCAACTTCGATAACCTCACTCCGTTGTTCCCCGATCAACGGTTCCGGCTCGAGCTGGAGGACTCAACCCGCAAGGATCTGTCGGCGCGGGTTATCGATATCGTGGCTCCGATCGGCAAGGGACAGCGTGCGCTGATCGTGGCTCCGCCGCGCACCGGCAAGACCGTGCTGATGCAGAATATCGCGCACTCCATCACCGCCAATCATCCCGAATGTTATCTGATCGTTCTTCTGATCGACGAGCGCCCGGAGGAAGTCACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCGTGTCCTCGACGTTCGACGAGCCGGCGGTGCGCCATGTCCAGGTCGCGGAGATGGTGATCGAAAAGGCCAAGCGTTTGGTCGAGCACGGCCGCGACGTCGTGATCCTGCTCGATTCGATCACGCGTCTGGGGCGCGCCTACAACACCGTCGTGCCCTCTTCCGGCAAGGTGCTGACCGGCGGCGTTGACGCCAATGCCTTGCAGCGTCCGAAGCGTTTCTTCGGCGCAGCGCGCAACATCGAGGAAGGCGGATCGCTGACCATCATCGCCACCGCGCTGGTCGACACCGGCAGCCGCATGGACGAAGTAATCTTCGAGGAGTTCAAGGGCACCGGCAACTCGGAACTGATCCTCGACCGCAAGGTCGCCGACAAACGCACCTTCCCGGCGATCGACATCGCCCGCTCCGGCACCCGCAAGGAAGAATTGATCACCGACCCGCAACTGCTCAAGAAGATGTACGTGTTGCGGCGCATTCTCAACCCGATGGGCACCATGGATGCGATCGAGTTCCTGCTCGACAAGCTG
PROTEIN sequence
Length: 406
MREMKLQDLKAKTPAELVSFAEELGVENASTMRKQELMFAILKQLAIQEIDIIGEGVVEVLSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVNTLNFEDPEKSKHKVNFDNLTPLFPDQRFRLELEDSTRKDLSARVIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVADKRTFPAIDIARSGTRKEELITDPQLLKKMYVLRRILNPMGTMDAIEFLLDKL