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SCNpilot_cont_300_bf_scaffold_1935_curated_21

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 21881..22126

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KKP5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 130
  • Evalue 8.70e-28
XRE family transcriptional regulator {ECO:0000313|EMBL:EQB33893.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 130
  • Evalue 1.20e-27
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 81.0
  • Bit_score: 126
  • Evalue 4.00e-27

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Taxonomy

Sphingobium ummariense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGATCACCGCCCGACAATCGCGGGCCGCGCGCGCGTTGCTGGGTTGGACGCAGGAGACGCTCGCTGACAAGGCCCGAGTATCACTTACAGCGCTCAAGCGCCTTGAGTCGGAGAGCGACCTCGCAGTCTACGAATCGACACGCGACCAGGTCCGTCGCGCACTCGAAGCGAGCGGCGTGGTCCTCCTCAACTCGGACCAAGGTGAAGGCGTCATGGTAATGAGGAATAAGAACACCCAAACGTGA
PROTEIN sequence
Length: 82
MITARQSRAARALLGWTQETLADKARVSLTALKRLESESDLAVYESTRDQVRRALEASGVVLLNSDQGEGVMVMRNKNTQT*