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SCNpilot_cont_300_bf_scaffold_1935_curated_32

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 28154..29443

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037740F8 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 358.0
  • Bit_score: 624
  • Evalue 7.70e-176
Type VI secretion protein {ECO:0000313|EMBL:KEQ52102.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 358.0
  • Bit_score: 623
  • Evalue 2.40e-175
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 358.0
  • Bit_score: 589
  • Evalue 8.60e-166

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGAGCGTCGAGGACGAGTTCCGCATCCGCCCCGGCCGCATCCGCTCGACGCGCGCCCAGCGCGCTCGGCCGTTCATCGCGCAGGCGCTTGCCGCCGCGCAGCGGGCCGGCGGTCACGTCTCACGCTCGGGCAACATCAGCTCCGGCACGGGATCGCGCTTCGGACGTGGCCGCCGCGCGACCGTACAGGCGAACCGTCTGCTCACCAGCCGTTCGCGCATCACGGTCATCAAGACCCGCGTCGTTCGCCATTCGGCGCGCTCGGCGCCGCTTGCAACACACCTCAGCTATCTCCGCCGCGAAGGCGTGACCCGGGATGGGGAGAAGGCCCGTCTCTTCGGACCCGGCGGCGACGACTTGGATGCCAAGGAGTTTGCCGAGCGTTGCGAGGACGATCGCCACCACTTCCGCTTCATCGTCTCGCCCGAGGATGCGACCGAGATGTCGGACCTCAAGATCTTCGCCCGCGACCTGATGAACCAGATGGAGAAGGACCTCGGCACCAAGCTGGACTGGGTGGGCATTGATCATTGGAACACCGACAATCCCCACGTCCACATCATCCTGCGCGGCCGCTCCGACGACGGCCAGGATCTCGTCATCTCGCGCGACTACATCAAGGAAGGCATGCGTGCTCGCGCACAGGATCTCGTGACGCAGGAGTTGGGCCCACGCACGGATCAGGAGATCCGGCGCAACCTCGAACGTCAGGTCGAGTCGGAGCGCTGGACCAACCTCGACCGGCAACTCTCGCGTGACGCGTATCGGACAGGCGTCATCGATCTCGCTCCGAGCCCTGATCGCCAGCCTGACGAGTTTCACGTCCTGAAAGTCGGACGGCTGCGCAAGCTGGAGGCTCTGGGCCTCGCCGATCAGATCGGCCCGGGCCAGTGGGTGATGGTCGAGAATGCCGAGACCACTCTGCGCGAGCTTGGCGAGCGAGGCGACATCATCAAGCGCATCCATCGCGGGCTGGCCGAGCGCAATATCGAGCGTGGCACCTCGAGTTTCGTGCTCGCCGGAGAGAGCCTCGACGACCAGATCGTTGGTCGCCTCATAGCGCGTGGTCTCGATGNNNNNNNNNNNNNACCCATCACATCAAGCTCGCCGACCTCGATGCTGCTGGGGACTCGGGCCCAGGTTCGATCGTCGAGCTGCGCAAGTTTGATGACGCGCAGGGCCGGCGACGCGTTGCGCTCGCAGTTCGATCGGACATCCCGCTCGAGCAGCAGATTACTGCCAACGGCGCCACCTGGCTGGACCGCCAAGCGATTGCGCGCGAACCGGTAG
PROTEIN sequence
Length: 430
MSVEDEFRIRPGRIRSTRAQRARPFIAQALAAAQRAGGHVSRSGNISSGTGSRFGRGRRATVQANRLLTSRSRITVIKTRVVRHSARSAPLATHLSYLRREGVTRDGEKARLFGPGGDDLDAKEFAERCEDDRHHFRFIVSPEDATEMSDLKIFARDLMNQMEKDLGTKLDWVGIDHWNTDNPHVHIILRGRSDDGQDLVISRDYIKEGMRARAQDLVTQELGPRTDQEIRRNLERQVESERWTNLDRQLSRDAYRTGVIDLAPSPDRQPDEFHVLKVGRLRKLEALGLADQIGPGQWVMVENAETTLRELGERGDIIKRIHRGLAERNIERGTSSFVLAGESLDDQIVGRLIARGLDXXXXXPITSSSPTSMLLGTRAQVRSSSCASLMTRRAGDALRSQFDRTSRSSSRLLPTAPPGWTAKRLRANR*