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SCNpilot_cont_300_bf_scaffold_1935_curated_34

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 29888..31873

Top 3 Functional Annotations

Value Algorithm Source
Putative plasmid transfer factor, traG protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETT6_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 661.0
  • Bit_score: 1228
  • Evalue 0.0
Putative plasmid transfer factor, traG protein {ECO:0000313|EMBL:ABQ39580.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 661.0
  • Bit_score: 1228
  • Evalue 0.0
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 661.0
  • Bit_score: 1228
  • Evalue 0.0

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Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1986
ATGTCCGCAACCAAGATCCTCTGGGGCCAGCTCCTCGCCGTCGCACTGATCATCCTCGGCACGACGTGGGTCGCGACCGAGTGGACGGCGTGGCGATTGGGCTTTCAAGCCCAGCTCGGCGAGCCATGGTTCATCGTGTTCGGCTGGCCAGTCTACTATCCACCGTCCTTCTTTCTGTGGTGGTATTTTTACGACGCCTATGCGCCGCCGATCTTCGTGGAAGGGGCCGTCATCGCAGCGTCAGGCGGCTTCATCGCGATCGCAGTCGCGATCGGCATGTCGGTGTGGCGTGCCCGCGAGGCGACGAACGTCGACACCTACGGCTCGGCACGATGGGCCCGGACCGACGAAGTGGATGCGGCGGGCCTCCTCGGTCCCGACGGCGTCGTACTCGGCAAGCTGGGCCGCGACTACCTCCGGCACGACGGGCCCGAGCATGTTCTCTGCTTTGCGCCGACGAGGAGTGGGAAGGGCGTGGGGTTGGTCATTCCCTCGCTGCTCACCTGGCCAGGCAGCGCGATCGTCCACGACATCAAAGGGGAGAACTGGCAGCTCACTGCCGGGTTTCGGTCGCAGCATGGCAGGGTGCTGTTGTTCGATCCGACCAACGCGAAGTCTTCCGCCTACAACCCGCTGCTCGAAGTCCGGCGCGGGGAATGGGAAGTCCGGGATGTCCAGAACATCGCCGATATCCTGGTCGATCCCGAAGGCTCGTTGGAGAAGAGGAACCATTGGGAGAAGACCTCCCATGCGCTGCTGGTCGGCGCCATCCTCCACGTGCTCTACGCGGAGGAGGACAAGACGCTCGCCGGCGTGGCGTCGTTCTTGTCCGACCCGCGGCGTCCGATCGAGTCCACGCTCGCGGCGATGATGAAGACCGCCCATCTCGGCGAGGCAGGACCGCATCCGGTGATTGCGAGTGCAGCACGAGAGCTGCTGAATAAATCGGACAACGAACGAAGCGGGGTGTTGAGCACCGCGATGTCGTTCCTCGGCCTCTATCGCGATCCTGTTGTGGCTGCCGTCACACGCCGTTGTGACTGGCGGATCACCGACATTGTCGGAGATACACGGCCGACGACCCTCTATCTCGTCGTGCCGCCATCCGACATTGTTAGGACCAAGCCGTTGATCAGGTTGATCCTCAACCAGATTGGCCGCCGCCTGACGGAGGACTTGAACAGCAAGGCCCGGCGGCATCGGCTTCTACTCATGCTCGATGAGTTTCCGGCGCTTGGCCGCCTTGACTTCTTCGAGAGCGCACTCGCCTTCATGGCCGGCTACAAATTGAAGAGCTTCATGATCGCGCAGAGCCTCAACCAGATCGAAAAGGCATACGGCCCGAACAACTCCATCTTGGATAATTGCCACGTCAGAATCTCGTTCGCGACCAACGACGAAAGGACAGCCAAAAGGGTCAGCGACGCCCTCGGCACCGCGACCGAACTGCGGGCGATGCGGAACTACGCCGGGCACCGGCTCAGTCCGTGGCTCGGCCATCTGATGGTCTCGCGCTCCGAGACGGCCCGGCCCCTGCTCACGCCGGGCGAGATCATGCAGCTCCCGCCCGCAGACGAGATCGTAATGGTGGCGGGCACGCCGCCCATTCGCGCGAAGAAGGCGCGCTATTTCGAAGATGCCAGGTTTCGGGCGCGAATCTTGCCGCCTCCCATCCTGACGAAGACAGATCACCAGCAATCGGATGACTGGACGGGCAGGCCCTTGCCGCCGCGACCCTTGCAGGACGCCGCGCCGTCAGTGAGCGGCGTGGACGACGAGGACTCGACGGGCTCCGAGAGGCGCCGCCAGCCGGAGCTGGATCGCGTGGCACCGATCGAGAAGAAGCCGCCCATCGCCAATGAGTTCGAGATCGACCTCAACGACGACGAGCCCGACGATGCCGCGCGGCTAAGCCGCATGAACCGACTCGTGCAAGGCATCGCGCGGCAGGTCTCGCTCGATCCGAACGATGGCATGGAACTGTAG
PROTEIN sequence
Length: 662
MSATKILWGQLLAVALIILGTTWVATEWTAWRLGFQAQLGEPWFIVFGWPVYYPPSFFLWWYFYDAYAPPIFVEGAVIAASGGFIAIAVAIGMSVWRAREATNVDTYGSARWARTDEVDAAGLLGPDGVVLGKLGRDYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKGENWQLTAGFRSQHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNHWEKTSHALLVGAILHVLYAEEDKTLAGVASFLSDPRRPIESTLAAMMKTAHLGEAGPHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAAVTRRCDWRITDIVGDTRPTTLYLVVPPSDIVRTKPLIRLILNQIGRRLTEDLNSKARRHRLLLMLDEFPALGRLDFFESALAFMAGYKLKSFMIAQSLNQIEKAYGPNNSILDNCHVRISFATNDERTAKRVSDALGTATELRAMRNYAGHRLSPWLGHLMVSRSETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKKARYFEDARFRARILPPPILTKTDHQQSDDWTGRPLPPRPLQDAAPSVSGVDDEDSTGSERRRQPELDRVAPIEKKPPIANEFEIDLNDDEPDDAARLSRMNRLVQGIARQVSLDPNDGMEL*