ggKbase home page

SCNpilot_cont_300_bf_scaffold_23430_curated_3

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 749..2086

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbE n=1 Tax=Afipia birgiae RepID=UPI000304E9BC similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 414.0
  • Bit_score: 738
  • Evalue 2.90e-210
Conjugal transfer protein ATPase TrbE {ECO:0000313|EMBL:GAJ29788.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 414.0
  • Bit_score: 763
  • Evalue 1.50e-217
trbE2; conjugal transfer protein trbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 414.0
  • Bit_score: 734
  • Evalue 2.30e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGATGAACCTCGCCGAATACCGCCGCACCGCTACTCGCCTCGCAGATTTCCTGCCTTGGGTCGCGCTTGTTGGCCAAGGAGTCGTTCTGAACAAGGACGGCTCATTTCAACGCAGCGCAAGCTTTCGCGGTCCAGATCTGGACTCCGCTGTTGCAGCGGAACTGGTTGGCGTGGCGGCAAGGCTTAACAACGCTTTCCGCCGTCTCGGTTCGGGCTGGGCGATTTTTGTAGAGGCGCAGCGCTACCCCTCCAACCGCTATCCGGACAGCATCTTTCCCGATCCCGCGTCTGCGTTGCTCGATGCCGAGCGCAAGGCTGATTTCGAGGAAGAAGGCGCACATTTCGAGTCCCGCTACGTCCTCACGTTCGCTTGGCTGCCGCCGGCCGAGGATGCCGCGCGCGCGGAGGCTTGGCTCTACGAGGGAAGGGAACGGTCAGGTGTCGACCCTCACGAGATTCTGCGAGCCTTCGTCGACCGCACCGACCGCGTGCTCGCGCTGCTCCACGGCTTCATGAAGGAATGCCGTTGGCTGGATGACAGCGAGACGCTGACCTACCTGCATTCCTGCGTTTCCACTAAGCGCCATCGTGTCCGTGTTCCCGAGACACCGATGTATCTCGATGCGCTGCTGGCCGACCAGCCTCTCACCGGAGGCCTTGAGCCTCGTCTCGGCGATCAGCATCTGCGCACACTCACCATCGTAGGCTTCCCGACCGCGACGACGCCCGGCATCCTCGACGAGTTGAACCGGCTCGCATTCCCCTATCGTTGGGCAACACGTGCGATCCTGCTCGACAAGACCGACGCGACCAAGCTGCTCACCCGCATCAGGCGGCAATGGTTCGCAAAGCGGAAAAGCATTGCGGCCATCGTCAAAGAAGTCATGACGAATGAGGCGTCGGTCCTCGTAGACACCGACGCCGCCAACAAGGCCGCCGACGCCGACATGGCCCTTCAGGAACTCGGCGCGGATCTCGCCGGCATGGCCTACGTGACGGCTACGATTACCGTGTGGGACGGCGATCCACGCTTAGCCGACGAGAAGCTGCGCCTCGTCGAGAAGGTGATCCAGAGCCGCGACTTCACTGCGATGCTCGAGACCGTCAACGCGGTCGACGCCTGGCTCGGAAGCCTGCCCGGCCATCTGTATGCCAACGTCCGGCAGCCGCCGATCTCGACGCTCAACCTGGCGCACATGATTCCACTCTCGGCCGTCTGGGCCGGCCCTCAGCAAGATGAGCANNNNNNNNCCGCTTTTCGCTCCACGTTGGCGATGTGGGCCACACCTTGGTCGTGGGGCCAACCGGCTCCGGCAAATCAGTGCTGCTCGCGTTAA
PROTEIN sequence
Length: 446
MMNLAEYRRTATRLADFLPWVALVGQGVVLNKDGSFQRSASFRGPDLDSAVAAELVGVAARLNNAFRRLGSGWAIFVEAQRYPSNRYPDSIFPDPASALLDAERKADFEEEGAHFESRYVLTFAWLPPAEDAARAEAWLYEGRERSGVDPHEILRAFVDRTDRVLALLHGFMKECRWLDDSETLTYLHSCVSTKRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRTLTIVGFPTATTPGILDELNRLAFPYRWATRAILLDKTDATKLLTRIRRQWFAKRKSIAAIVKEVMTNEASVLVDTDAANKAADADMALQELGADLAGMAYVTATITVWDGDPRLADEKLRLVEKVIQSRDFTAMLETVNAVDAWLGSLPGHLYANVRQPPISTLNLAHMIPLSAVWAGPQQDEXXXXAFRSTLAMWATPWSWGQPAPANQCCSR*