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SCNpilot_cont_300_bf_scaffold_790_curated_46

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 52994..54883

Top 3 Functional Annotations

Value Algorithm Source
Putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z8B2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 631.0
  • Bit_score: 1007
  • Evalue 4.70e-291
ABC transporter permease {ECO:0000313|EMBL:KIZ41731.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 628.0
  • Bit_score: 1026
  • Evalue 0.0
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 631.0
  • Bit_score: 1007
  • Evalue 1.50e-291

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGGCTCGCGCCGAAGGCACGGAAGCGACGGCGGACCTGGAAACACCGAATTTCGCGCGCCTGCGCTCGCTGGCCGCGTCGCTCGACGCATGTCTCGGATATCTCGTCGAAGTGCCGGTCGCCGCGCTTGTCGTTACGGAAATCGTCGTATTGTTCGCGGGCGTGGTTTCTCGTTACCTGCTTCACCGGCCCCTGATCTGGTCCGATGAACTGGCGTCGATCCTGTTCCTGTGGCTGGCGATGCTGGGCGCGGTCACCGCATTCCGTCGTGGCGAGCACATGCGCATGACGGCGCTGGTCGCGCAGGCTCGCCCCGCACAACGCGCCTTCCTTGATACGGTCGGGATCTGCGCGGCCCTCGCCTTTTTGATCCTTATAGTCGGGCCATCGTGGAATTATGCCTATGAGGAAAGCTTCATCACCACGCCGGCGTTACAGATTTCCAACGTGTGGCGCGCGGCGGCGCTGCCGGTGGGCATCGGCCTGATGGCCGTCTTTGCACTGCTGCGGCTCGTGCGCAGCGGCAATATGCGGACCGTGCTGGGCGCCGCCGCGACTGTTGCAGTTGTAATTTTCGCATTCCGGCTGATGCAGCCGTGGCTGCTGCCGTTGGGCAACGTGAACCTCGTGATCTTTTTCGTCGGCGTGGCCGGACTCTGCGTATTCGCGGGCGTGCCGATCGCTTTCGGATTTGGCCTTGCGATCTACGGATATCTGGCGCTGACCACGCGGACGCCGCTGATGGTGCTGGTCGGGCGGATGGACGAGGGCATGAGCCATCTCATCCTGCTCGCCGTTCCGCTGTTCGTTTTCCTCGGCCTGCTGATCGAAATGACCGGGATGGCACGCGCCATGGTGGCCTTCCTTGCCAGCCTGCTCGGCCACGTTCGCGGCGGTCTGCATTACGTGCTGGTGGGTGCGATGTATCTGGTGTCAGGTATTTCCGGGGCCAAGGCGGCCGACATGGCGGCCGTGGCTCCCGTGCTGTTTCCGGAGATGAAGAAGCGCGGAGCCGAACCTGGCGATCTTGTCGCCCTGCTCGCGGCGACCGGAGCCCAGACGGAAACCATTCCGCCGAGCCTGGTGCTGATCACGATCGGCTCGGTGACCGGCGTATCGATCGCGGCCCTGTTCACCGGCGGATTGCTTCCGGGCGCCGTGCTGGCGATTGCGTTGTCCGCGCTGGTGTGGTGGCGGCACCGCGGCGACGACCTGAGCCACATCGAAAAGGCCGGGGCCGGCGAGATCGCCCGGACGTTCGTCGTCGCCCTGCCCGCGCTGGCGCTGCCGTTCGTGATCCGCGCTGCCGTCGTCGAGGGAATTGCGACCGCGACGGAGGTGTCGACCATCGGCATCGTCTATGCCGTTCTCGCCGGCCTGTTGCTCTATCGTCGTTTCGACTGGCGCAGGTTGCTGCCGATGCTGATCGAAACCGCCTCGCTGTCGGGTGCGATCCTGCTCATCATCGGAACGGCAACCGGCATGGCCTGGGGACTGACCCAGTCCGGCTTTGCCCGGACGCTGGCGGCCACGATGACCGACCTGCCCGGCGGCGGCGTCACCTTCATCGCCGTTTCGATCGTCGCCTTCACCGTTCTGGGCAGCGTGCTCGAAGGTATTCCGGCGGTCGTGCTGTTCGGCCCGCTGCTGTTTCCCATCGCCAGGGCTGTCGGGATTCACGAGGTCCACTACGCAATGGTCATTATCCTGGCCATGGGCATGGGGCTGTTCGCGCCGCCTTTCGGCGTAGGTTATTATGCCGCCTGCGCCATCGGTCGCGTCGATCCTGCCGAGGGGATCAGGCCGATCTGGAATTACATGCTGGCGCTGTTGATCGGCTTGATCGCCGTGGCGGCGTTCCCATGGATTTCGATTGGATTTCTGAAATAA
PROTEIN sequence
Length: 630
MARAEGTEATADLETPNFARLRSLAASLDACLGYLVEVPVAALVVTEIVVLFAGVVSRYLLHRPLIWSDELASILFLWLAMLGAVTAFRRGEHMRMTALVAQARPAQRAFLDTVGICAALAFLILIVGPSWNYAYEESFITTPALQISNVWRAAALPVGIGLMAVFALLRLVRSGNMRTVLGAAATVAVVIFAFRLMQPWLLPLGNVNLVIFFVGVAGLCVFAGVPIAFGFGLAIYGYLALTTRTPLMVLVGRMDEGMSHLILLAVPLFVFLGLLIEMTGMARAMVAFLASLLGHVRGGLHYVLVGAMYLVSGISGAKAADMAAVAPVLFPEMKKRGAEPGDLVALLAATGAQTETIPPSLVLITIGSVTGVSIAALFTGGLLPGAVLAIALSALVWWRHRGDDLSHIEKAGAGEIARTFVVALPALALPFVIRAAVVEGIATATEVSTIGIVYAVLAGLLLYRRFDWRRLLPMLIETASLSGAILLIIGTATGMAWGLTQSGFARTLAATMTDLPGGGVTFIAVSIVAFTVLGSVLEGIPAVVLFGPLLFPIARAVGIHEVHYAMVIILAMGMGLFAPPFGVGYYAACAIGRVDPAEGIRPIWNYMLALLIGLIAVAAFPWISIGFLK*