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SCNpilot_cont_300_bf_scaffold_1190_curated_8

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 7631..8368

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 487
  • Evalue 3.50e-135
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 487
  • Evalue 1.50e-134
tRNA pseudouridine synthase A n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=TRUA_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 487
  • Evalue 1.10e-134
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACAAGCTCACCATCGAATATGACGGCGGCCCGTTTTGCGGCTGGCAGTATCAGGACAACGGTCCCTCGGTGCAGGGCGCGCTGGAAGCGGCGGTGAAGGCGATCTGCGGCGACGACGTCCGCGTGCATGGCGCGGGCCGCACCGATGCAGGCGTTCATGCGCTGGCGCAGGTCGCGCATTGCGATATCGCCAAGCACTTCGCGCCGAACCGGCTGCGCGACGGGCTCAATGCGCACCTGCGGCCGCATCCGATCGGCGTGCTCGAAGCCGAGATCGTGCCCGACAGCTTCGAGGCGCGCTTCTCGGCACTCAAGCGGCATTACGTCTATCGCATCGCCAACCGGCGTGCGAACCTTGCCATCGATGTCGGCCACGTCTGGCGCGTCGCGCGGCCGCTCGATACCGACGCGATGCATGCGGCGGCGCAGCGGCTGATCGGCAAGCACGACTTCACGACCTTTCGCGACACTGAATGCCAGGCCAAATCGCCGGAGAAGACGCTCGATCAGCTGGACGTCGTCCGGAACGGCGACAACGTGACCATCATCACCTCGGCGCGCTCGTTCCTGCACAGCCAGGTTCGCTCGATGGTGGGATCATTGGTGTGGGTCGGGCATGGCCGCTGGAGCGCCGACGACCTGTCCACCGCATTGGCCGCGCGCCGCCGCGAGGCCTGCGGTCCCGTCGCCCCGCCAGATGGACTATATCTGGTGCGGGTGGATTATTAG
PROTEIN sequence
Length: 246
MPRYKLTIEYDGGPFCGWQYQDNGPSVQGALEAAVKAICGDDVRVHGAGRTDAGVHALAQVAHCDIAKHFAPNRLRDGLNAHLRPHPIGVLEAEIVPDSFEARFSALKRHYVYRIANRRANLAIDVGHVWRVARPLDTDAMHAAAQRLIGKHDFTTFRDTECQAKSPEKTLDQLDVVRNGDNVTIITSARSFLHSQVRSMVGSLVWVGHGRWSADDLSTALAARRREACGPVAPPDGLYLVRVDY*