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SCNpilot_cont_300_bf_scaffold_13766_curated_6

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(4400..5083)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer protein trbF n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU5_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 226.0
  • Bit_score: 425
  • Evalue 4.80e-116
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 226.0
  • Bit_score: 425
  • Evalue 1.50e-116
Putative conjugal transfer protein trbF {ECO:0000313|EMBL:ABQ39589.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 226.0
  • Bit_score: 425
  • Evalue 6.70e-116

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Taxonomy

Bradyrhizobium sp. BTAi1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTCAAACGGCCATCGACACACTACGGAAAGACCCCCGAACCCGAGACGCCATACCAGCGCGCGGCTCAGGCATGGGACGAGCGGATTGGCTCGGCTCGCGTGCAGGCAAAGAACTGGCGCCTCATGGCGTTCGGCTGCCTGTTCCTGTCCGCTGGATTTGCCGCGGCGCTCGTTTGGCAGTCTGCCCGTGGCACCGTGGTGCCATGGGTGGTTCAGGTCGACAATCTCGGCCAGGCCCAGGCCGTGGCGCCTGCCGTCGCGGACTACCGCCCCACCGATCCGCAGATCGCCTACCACCTTGCGCGCTTCATCGAGCACGTCCGTGGGCTGCCTGCCGATCCCATTGTCGTGCGCCAGAACTGGCTGCGGGCTTATGAATTCACCACCGATCGTGGCGCAGCGGCGTTGAACGACTATGCACGGGCGAACGATCCGTTCACCCGTGTTGGCAGACAGCAGGTCGCAGTCGAGGTGTCCAGCGTAATCCGGGCATCGCCGGACAGCTTCCGCGTCGCCTGGATCGAGCGCCGCTACGAGAACGGCCAACTCGCAGTGACCGAGCGTTGGACCGCCATCCTAACCGTCGTTCTGCAGACTCCGCGCGATGCCGAAAGGCTCCGCGCTAATCCGCTCGGCATCTACGTCAATGCGATCAACTGGTCGCGGGAGATGGGACAATGA
PROTEIN sequence
Length: 228
MFKRPSTHYGKTPEPETPYQRAAQAWDERIGSARVQAKNWRLMAFGCLFLSAGFAAALVWQSARGTVVPWVVQVDNLGQAQAVAPAVADYRPTDPQIAYHLARFIEHVRGLPADPIVVRQNWLRAYEFTTDRGAAALNDYARANDPFTRVGRQQVAVEVSSVIRASPDSFRVAWIERRYENGQLAVTERWTAILTVVLQTPRDAERLRANPLGIYVNAINWSREMGQ*