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SCNpilot_cont_300_bf_scaffold_1143_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 1855..4206

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 783.0
  • Bit_score: 1409
  • Evalue 0.0
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 783.0
  • Bit_score: 1409
  • Evalue 0.0
Ribonuclease R n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKL9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 783.0
  • Bit_score: 1409
  • Evalue 0.0

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2352
GTGAGTAAACCGCGCGACAGGCGTTTCCCGGATCGCGAGACCATCGTCGCCTTCATCCGTGCACATCCCGGACAATCCGGCACGCGTGAAATCGCCCGCGAGTTCGGGCTGAAGAACGCGGATCGCGTCACGCTGAAGAAAATCCTGCGCGATCTCGCGGAAGACGGCACGATCGTCAAGCGAGGCCGCAAGCTGCATCAGGCGGAAACGCTGCCGCCGACGCTGATGGCCGATATCACCGGACGCGACAGCGACGGCGAGCTGCTCGCGACGCCGACCGAGTGGGACGAGGAAGCAGGCACTCCGCCGAAAATCCGCATTCACGTCCCGCGCCGGGCAAAGCCCGGCACCGCGGCCGGCGTCGGCGACCGCGCGCTGCTTCGCATTGAGGCGACAGAGCCCGATGATTCCGCAGGTTATCGCGCCCGCGTCATCAAGGTAATCGAGCATACCCGCTCGCGCATCCTGGGCATCTACCGCGTCCTGCCTCAGGGCGGCGGCCGCCTCGTCCCGGTCGACAAGAAGCAGGCCGGACGAGAATTGAACATCGCGAAGGCCGACAGCGCCGATGCGGAAGACGGCGATCTGGTCAGCGTCGAGCTCGTACGCACCCGCGGCTTCGGTCTGGCGTCCGGCAAGGTGAAGGAGCGGCTTGGCTCGCTCGCGACCGAAAAGGCTGTCAGCCTGATCGCGATCCACGCGCATGACATTCCGCAAGTCTTTGCGCCGGCCGCCTTGCGCGAAGCAGAGGCTGCGAAGCCCGCGACCCTTCAGGGCCGCGACGACTGGCGCGCCCTGCCGCTCGTGACCATCGATCCGCCCGATGCCAAGGATCACGACGATGCGGTTCACGCTGCACCCGACGACGACCCGAGCAACAAGGGCGGCGCTGTCATTACGGTCGCCATCGCCGACGTTGCCTATTATGTGCGGCCTGAATCGGCGCTGGATCATGACGCGTTGAAGCGCGGCAATTCGGTCTATTTTCCCGATCGCGTGGTGCCGATGCTGCCGGAGCGCATCTCCAACGATCTTTGCTCGCTGGTGCCGGGGCAAGCGCGCGGGGCTCTCGCCGTGCGGCTGGTGATAGGTCCCGACGGCCGCAAGCGCTCGCATACGTTTCACCGCATCCTGATGCGCTCTGCGGCGAAACTGAACTATGCGCAGGCGCAGGCCGCGATCGACGGCAACCCCGACGATGTCACCGGCCCCCTGCTCGCGCCGATCCTGAAACCGCTCTATGCGGCTTACGCTCTGGTGAAGCGCGCGCGCGACGAGCGCGATCCCCTCGATCTCGAATTGCCCGAGCGCAAGATTCTGCTGAAGCAAGACGGAACGGTTGACCGCGTCATCGTGCCGGAGCGGCTCGACGCACATCGGCTGATCGAGGAATTCATGATCCTTGCCAACGTCGCCGCCGCCGAGACGCTGGAGAAGAAAGATCTGCCGCTGATCTATCGCGTCCATGACGAGCCGACAGTGGAGAAAGTTCACAACCTCCGCGAATTCCTGAGAACGCTGGATATATCCTTCGCCAAGAGCGGCGCGCTGAGACCCGAGCTGTTCAATCGCGTGCTCGATCACGTCAAAGGCCACGACTCCGAGTCGCTGGTGAACGAGGTCGTGCTTCGGTCGCAGGCGCAGGCCGAATATTCTGCCGAGAACTATGGCCACTTCGGCCTCAACCTGCGCCGCTACGCACATTTCACCTCTCCGATCAGGCGATATGCCGACCTGATCGTGCACCGCGCCCTGATCCTGGCGCTCGGCCTCGGCGACGGCGCGTTGCCAGCGACCGAAACCGCCGAGACGCTGGCCGAGGTCGCCGCACAGATTTCGGTCACCGAGCGCCGCGCCATGAAGGCGGAACGCGAGACATCCGACCGCCTGATCGCTCATTTCCTCGCCGACCGCATCGGAAATATCTTCGAGGGCCGGATTTCGGGCGTAACGCGCGCGGGGCTGTTCGTGAAACTGACCGACACCGGCGCAGACGGGCTGATCCCGATCAGGACGCTGGGCACGGAATATTTCAACTACGACGAGAGCCGCCATGCGCTGGTCGGCTCGCGTAGCGGTTCCATGCACAAGCTGGGTGACGTGGTGGAGGTTCGTCTGGTAGAAGCTGTCCCCTTGGCAGGTGCTCTACGTTTCGAACTCCTGTCCGGAGGAGATTCCGGGTCACGCGATCCTCGCCAGCGCGAGGGACGAAACAGGAAGGGGACGCGCGGCTCGCAAAGCGCGCGACATCCCAAAATCCATTCGAAGGCTCATCCGAGCCGCAAACCGCGCAAGACATCGCGCAAGCCGGGCAAGAGCAAGACCGGCAAACCGAAGAAGGGCAAATCATGA
PROTEIN sequence
Length: 784
VSKPRDRRFPDRETIVAFIRAHPGQSGTREIAREFGLKNADRVTLKKILRDLAEDGTIVKRGRKLHQAETLPPTLMADITGRDSDGELLATPTEWDEEAGTPPKIRIHVPRRAKPGTAAGVGDRALLRIEATEPDDSAGYRARVIKVIEHTRSRILGIYRVLPQGGGRLVPVDKKQAGRELNIAKADSADAEDGDLVSVELVRTRGFGLASGKVKERLGSLATEKAVSLIAIHAHDIPQVFAPAALREAEAAKPATLQGRDDWRALPLVTIDPPDAKDHDDAVHAAPDDDPSNKGGAVITVAIADVAYYVRPESALDHDALKRGNSVYFPDRVVPMLPERISNDLCSLVPGQARGALAVRLVIGPDGRKRSHTFHRILMRSAAKLNYAQAQAAIDGNPDDVTGPLLAPILKPLYAAYALVKRARDERDPLDLELPERKILLKQDGTVDRVIVPERLDAHRLIEEFMILANVAAAETLEKKDLPLIYRVHDEPTVEKVHNLREFLRTLDISFAKSGALRPELFNRVLDHVKGHDSESLVNEVVLRSQAQAEYSAENYGHFGLNLRRYAHFTSPIRRYADLIVHRALILALGLGDGALPATETAETLAEVAAQISVTERRAMKAERETSDRLIAHFLADRIGNIFEGRISGVTRAGLFVKLTDTGADGLIPIRTLGTEYFNYDESRHALVGSRSGSMHKLGDVVEVRLVEAVPLAGALRFELLSGGDSGSRDPRQREGRNRKGTRGSQSARHPKIHSKAHPSRKPRKTSRKPGKSKTGKPKKGKS*