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SCNpilot_cont_300_bf_scaffold_1627_curated_6

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 7259..8110

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 284.0
  • Bit_score: 498
  • Evalue 1.00e-138
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 284.0
  • Bit_score: 498
  • Evalue 4.50e-138
Shikimate dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=AROE_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 284.0
  • Bit_score: 498
  • Evalue 3.20e-138
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGTCAGCCGAGAGTAGAGTCGCTGCCGCCTGCCTGATCGGATGGCCTGCGGCGCATTCGCGCTCGCCCTTGATCCATCATTACTGGCTGCGCCTGTACGGCATCGATGGCGGCTATAGCATCGAGGCGATTCCGCCCGAGGGTCTCGCCGAATTCGTCATGCATCTGTCGATGCACGGCTTCGTCGGCGCCAACGTCACGATCCCGCACAAGGAACGGGCGCTGCAACTGACCCTACCCGATGCGCGTGCTGCGGCAGTCGGCGCCGCCAACACGCTCTATTATGAAGGCGAGACTTTGCGATCCACCAATACCGACGTCGAGGGTTTCATCGGCAATCTGGATGCCGCCGCGCCGGGTTGGGATCGCACCGAGGATGCGCTGGTGCTTGGCGCCGGCGGATCGTCGCGCGCCGTGGTGTTTGGGCTGATCGAACGCGGGATCAAGCGCATCCATCTCGCCAACCGCACCATGGATAGAGCACAGGCCCTCGCCGATCAATTCGGCGGAGCCGTCGTGCCGTTGACCTGGAGCAGGCTGGGCGAGGTGCTGCCGCGCGTTGGGCTGCTCGTGAATACCACCTCGCTCGGCATGGCGGGGCAGCCTCCGCTGAATGTCGAACTACCGCTGCTGCCACCGGACGCGGTGGTCGCCGACCTGGTCTATGTTCCGCTGGAAACGCCGCTGCTCGCGGCGGCGAAGGTGCGCGGTCTCAGGACCGCCGACGGTCTCGGAATGCTGCTGCATCAGGCGGTGCGCGGATTTGAACTGTGGTTCGGGCGGCGTCCGGTGGTGACGCCGGAATTGCGCGCTCTGGTCGAGGCCGATCTCTGCCCTCATTCGGCGACTTGA
PROTEIN sequence
Length: 284
MSAESRVAAACLIGWPAAHSRSPLIHHYWLRLYGIDGGYSIEAIPPEGLAEFVMHLSMHGFVGANVTIPHKERALQLTLPDARAAAVGAANTLYYEGETLRSTNTDVEGFIGNLDAAAPGWDRTEDALVLGAGGSSRAVVFGLIERGIKRIHLANRTMDRAQALADQFGGAVVPLTWSRLGEVLPRVGLLVNTTSLGMAGQPPLNVELPLLPPDAVVADLVYVPLETPLLAAAKVRGLRTADGLGMLLHQAVRGFELWFGRRPVVTPELRALVEADLCPHSAT*