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SCNpilot_cont_300_bf_scaffold_4267_curated_9

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 7904..8872

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 517
  • Evalue 2.40e-144
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 517
  • Evalue 1.10e-143
Pseudouridine synthase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPV6_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 517
  • Evalue 7.60e-144

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GTGCACAGTCCGGACCTGTCGCGCTCCCGCCTGAAGTCGCTGATCCTGGCAGGTCAGGTCCTCGTTGCAAAACCTTCCATTGCGAAGGACCCGGCCAAGACTGCCCCCACCAAGACTGCCCCCATTCGTGACCCCGCTTACCATGTCGCTGCCGGGGATACGATCACAATCGACGTTCCGCCCGCAATATCCGCCGAACCGAAAGGAGAGGCCATTGCGCTCGATATCGTTTACGAAGACGACGATCTGATCGTCGTCAACAAGCCGAAGGGACTGGTCGTCCATCCCGCGGCGGGGCACGAGACGGGAACGCTGGTCAACGCCCTCATTGCGCATTGCGGCGAAAGCCTGTCCGGCATCGGCGGCGTCCGTCGCCCCGGTATCGTACATCGGCTGGACAAGGACACCACCGGCCTCATGGTCGCGGCCAAGAATGACGCCGCACATAAATCGCTGAGCGCGCAATTCGCCGATCACGGACGCACGGGCGCGCTGCAGCGGGGCTATCTTGCTTTTGTGTGGGGATTGCCAAACCGTCCGCACGGCACCGTGGACGCGCCCATCGACCGTCATCCCTATGCCCGCGAAAAGATGGCGGTGCGGGCTGGCGGACGCGAAGCGATCACCTACTGGGAGGTCCGAGAGGCCTTCACCAGCCGCGACGGCAAACCAGTTGCCGCCCTCCTCGCCTGCCGGCTCGCGACCGGCCGCACCCATCAGATCCGGGTGCACCTCGCTCATGCCGGCCACCCCCTGTTGGGCGACGACGTCTACGGCCCGCATTTCAAGACCAAGGCCAATCAACTAGAAGCATCGGCCCGGACCGCCCTCGGCGCCCTTGAGCGGCAGGCGCTCCATGCCTATCTGCTGGTGATCGAGCATCCCCGGACCGGAGAGGTCCTGCGTTGGGAGGCGGACCTGCCCAAGGACTTGTTTTTGCTGAAGACGGCCCTGGCGGCGACGGAATGA
PROTEIN sequence
Length: 323
VHSPDLSRSRLKSLILAGQVLVAKPSIAKDPAKTAPTKTAPIRDPAYHVAAGDTITIDVPPAISAEPKGEAIALDIVYEDDDLIVVNKPKGLVVHPAAGHETGTLVNALIAHCGESLSGIGGVRRPGIVHRLDKDTTGLMVAAKNDAAHKSLSAQFADHGRTGALQRGYLAFVWGLPNRPHGTVDAPIDRHPYAREKMAVRAGGREAITYWEVREAFTSRDGKPVAALLACRLATGRTHQIRVHLAHAGHPLLGDDVYGPHFKTKANQLEASARTALGALERQALHAYLLVIEHPRTGEVLRWEADLPKDLFLLKTALAATE*