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SCNpilot_cont_300_bf_scaffold_1859_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 1147..2151

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLN4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 297.0
  • Bit_score: 493
  • Evalue 1.20e-136
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 297.0
  • Bit_score: 493
  • Evalue 3.90e-137
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE62863.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 297.0
  • Bit_score: 493
  • Evalue 1.70e-136

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGTTTCTGTTGGGATTGGCAGCCGTCGCAGCGTCGGCCGGCTGCATCTTGACCACGGATCTTCCTGATCCGGCGCTGGACATACCGGCCGGATACAAGGCGACACGGCCGGCTACGCCCGATGCTCCGCCGACGCTCGACTGGTGGCGCGGCTTTCGCTCCTCGGAACTGACCGACCTGATGGAGGAGGCCCAGACCGTCAACCTGGACATCGCCGCTGCGACGTCGCGGATCATTCAGGCCGATCAGCAAGCCCGGATCGCTGGCGCGGCGTTGTTGCCGAGCATCAGTGTCGGCGGACAGGAAACCTATTCCCGCATCTCGGGCTCCAGCTCCAGCGGCCTCAGCATTGGCGGCCGGGAAGTGGTGAACTATTCATCCACCCTGAGCGCCGCCAGCTATGAGATCGATTTCTGGGGCAAAAATCGCGACGCCGCTCGGGCTGCGGAGGAAACTGCGAACGCGAACCGCTTTGACCGGGACGTGGTTGCGCTGACGACGCTCTCGAGTGTCGCCAATGCCTATTTTCAGGTGCTCGCGTCGCAGGATCGCATTCGAACCGCCGAGCGCAACATCGCCAGCGCCGCGCGCGTCCTCGAGGCGATCAAGCAGCGGCTGAATGCCGGCACGGGGAGCGATCTCGATGTGGCGCAACAGGAAAGCGTGCTGGCAAATCAGCGCGCCGCCGTTCCGCCGCTTCGTGAGATTCTGGGACAAAACATCAACGCGCTCGCGACGCTGGTGGCTCGTCCGCCTGAAAGCGTGAAGGTCAAGGGCGGTTCGCTCAACCGGATCGCCGTCCCGCGGGTTACTCCGGGTCTGCCCTCGGAACTGCTGACGCAGCGTCCTGATATCCGCCGTCAGGAGGCCCAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGTCTTGCCGGCGGTCTGACGCAGCCGATTTTCGACGGCGGCCGGATTCTCGGCAACTTCGAATATACCAGGGCGAGACAGGATGA
PROTEIN sequence
Length: 335
MFLLGLAAVAASAGCILTTDLPDPALDIPAGYKATRPATPDAPPTLDWWRGFRSSELTDLMEEAQTVNLDIAAATSRIIQADQQARIAGAALLPSISVGGQETYSRISGSSSSGLSIGGREVVNYSSTLSAASYEIDFWGKNRDAARAAEETANANRFDRDVVALTTLSSVANAYFQVLASQDRIRTAERNIASAARVLEAIKQRLNAGTGSDLDVAQQESVLANQRAAVPPLREILGQNINALATLVARPPESVKVKGGSLNRIAVPRVTPGLPSELLTQRPDIRRQEAQLXXXXXXXXXXXXXXQSCRRSDAADFRRRPDSRQLRIYQGETG*