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SCNpilot_cont_300_bf_scaffold_1249_curated_19

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(18069..18428)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Nitrobacter RepID=RL20_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 6.90e-58
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 2.20e-58
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 9.70e-58

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTCGCGTCAAGCGCGGTGTGACGGCTCATGCCAAGCACAAGAAAGTCTACAAGGTCACCAAGGGCTTTTCCGGCCGCCGGAAGAACACCATTCGCGCCGCCAAGGCGGCCGCCGACAAGGCCGGCCAGTACGCCTTCCGCGACCGCAAGCGCAAGAAACGCACCTTCCGCGCGCTCTGGATTCAGCGCCTCAACGCCGCCGTGCGGCCGTTCGGCATGACCTACAGCCGCTTTATCGACGGGCTGTCGAAGTCGGGCATCACCGTTGACCGCAAGGTGCTGTCGGACCTCGCTATTCACGAGCCGGCGGCGTTCCAGGCGATTGCCGAGAAGGCCAAGGCCGCGCTGGCGGCCTGA
PROTEIN sequence
Length: 120
MARVKRGVTAHAKHKKVYKVTKGFSGRRKNTIRAAKAAADKAGQYAFRDRKRKKRTFRALWIQRLNAAVRPFGMTYSRFIDGLSKSGITVDRKVLSDLAIHEPAAFQAIAEKAKAALAA*