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SCNpilot_cont_300_bf_scaffold_6449_curated_5

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 5676..6014

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=2 Tax=Nitrobacter RepID=RS12_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 228
  • Evalue 2.50e-57
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 228
  • Evalue 7.80e-58
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 228
  • Evalue 3.50e-57

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCCGACGATCAACCAGCTGATCGCAAGTCCGCGCGTCATACAGAAGTCGCGCAAGAAGGTTCCTGCGTTGCAACAGTCGCCGCAAAAGCGTGGCGTGTGCACGCGTGTCTATACGACCACTCCGAAGAAGCCGAACTCGGCGCTTCGCAAGGTCGCCAAGGTGCGCCTGACCAATGGCTTCGAGGTCATCGGTTATATCCCGGGTGAGGGGCATAACCTTCAGGAGCATTCCGTGGTCATGATCCGCGGCGGCCGCGTCAAGGACTTGCCCGGCGTGCGCTACCACATCCTCCGCGGCGTCCTCGACACCCAGGGCGTCAAGAACCGCAAGCAGCGT
PROTEIN sequence
Length: 113
MPTINQLIASPRVIQKSRKKVPALQQSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVLDTQGVKNRKQR