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SCNpilot_cont_300_bf_scaffold_53727_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 1052..1756

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 235.0
  • Bit_score: 467
  • Evalue 3.50e-129
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 235.0
  • Bit_score: 467
  • Evalue 1.60e-128
DNA-directed RNA polymerase subunit beta n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RPOB_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 235.0
  • Bit_score: 467
  • Evalue 1.10e-128

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGGTGCAGCAGACGTTCACCGGTCGCAAGCGGGTTCGCAAGTTCTTTGGGCATATCCGGGAAGTCGCCGAGATGCCGAACCTGATCGAGGTTCAGAAGGCGTCCTACGACCAGTTCCTGATGGTTGACGAACCGCCCGGTGGCCGGCTCGACGAAGGTCTGCAGGCGGTTTTCAAGTCGGTGTTTCCGATCAATGACTTTTCGGGAACCTCGCAGCTCGAATTCGTGCGCTACGAATTCGAGGCGCCGAAGTACGACGTCGACGAGTGCCGCCAGCGCGGCATGACCTATGCCGCCCCGCTGAAGGTGACGCTTCGCCTCATCGTGTTCGACATCGACGAGGAAACCGGCGCGAAGTCGGTGAAGGACATCAAGGAGCAGGACGTCTACATGGGCGACATTCCGCTCATGACCATGAACGGCACCTTCGTCGTCAACGGCACCGAGCGCGTGATCGTCTCGCAGATGCATCGTTCGCCCGGCGTGTTCTTCGATCACGACAAGGGCAAGACTCACTCCTCCGGCAAGCTGCTGTTCGCCGCGCGCGTCATTCCCTATCGCGGCTCGTGGCTCGACATTGAGTTCGACGCCAAGGACATCGTGTTTGCGCGAATCGACCGCCGCCGCAAGATCCCGGTGACGTCGCTGATGTTTGCCCTCGGCCTCGACGGCGAGGAGATCCTGAGCACGTTCTACAAGAAAATT
PROTEIN sequence
Length: 235
MVQQTFTGRKRVRKFFGHIREVAEMPNLIEVQKASYDQFLMVDEPPGGRLDEGLQAVFKSVFPINDFSGTSQLEFVRYEFEAPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGAKSVKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMFALGLDGEEILSTFYKKI