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SCNpilot_cont_300_bf_scaffold_2140_curated_1

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 3..230

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJG9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 74.0
  • Bit_score: 136
  • Evalue 1.10e-29
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 74.0
  • Bit_score: 136
  • Evalue 3.50e-30
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 74.0
  • Bit_score: 136
  • Evalue 1.60e-29

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
CAGGCGTTGACCGGCGCGATGGACGTGCTCAATCCGCGCGAACGCCGCATCTTCGAGGCGCGCCGCCTCGCCGATGAGCCAATGACGCTGGAGGATCTCGCTGCCGAATTCAACGTATCCCGCGAACGCGTGCGGCAGATCGAGGTCCGCGCCTTCGAGAAGGTGCAATCGGCAGTGAAGACCGCGATCGCACGGCAGGAGCAAGCCGCTCTGGAAGCCGCCCGCTAA
PROTEIN sequence
Length: 76
QALTGAMDVLNPRERRIFEARRLADEPMTLEDLAAEFNVSRERVRQIEVRAFEKVQSAVKTAIARQEQAALEAAR*