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SCNpilot_cont_300_bf_scaffold_1978_curated_25

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(29503..30321)

Top 3 Functional Annotations

Value Algorithm Source
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 268.0
  • Bit_score: 451
  • Evalue 2.30e-124
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 268.0
  • Bit_score: 451
  • Evalue 1.00e-123
Indole-3-glycerol phosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=TRPC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 268.0
  • Bit_score: 451
  • Evalue 7.40e-124
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGCCGACATCCTGACCAAGATCGAAGCCTACAAGCGCGAGGAAATCGCAGCCGCCAAGAGCGCGCGCCCGCTTTCCGAAGTGACGGCCGCCGCCAGGGCAGCATCGCCGCCGCGTGGCTTCGTCCAGGCCATCCGCGCAAAACACGCCCGCGGCGACTATGCCCTGATCGCCGAAATCAAGAAGGCCTCGCCCTCGAAGGGCCTGATCCGCGCCGACTTCGATCCGCCGGCGCTGGCGCGCGCCTATGAGGCCGGTGGCGCAGCCTGTCTTTCCATCCTGACAGACGCGCCCTCCTTTCAGGGCCGGCTCGATTTCATGACCGCCTCCCGCGCTGCGACGTCGCTGCCGGTGCTGCGCAAGGATTTCATGTTCGACACCTATCAGGTGGCCGAGGCCCGCGCGCATGGAGCCGACTGCATCCTGATCATCATGGCCGCGCTCGACGATGCCGCGGCGAACGACATCGAGGCGGCCGCGCTCGATCTCGGCATGGACGCGCTGCTCGAAATCCATAATCGCGAGGAACTGGATCGCGCGCTGAAACTCCACTCGCCGATGATCGGCATCAACAACCGCAACCTGCGCACGTTCGAGACAACGCTCGCCACCAGCGAAGCGCTGGCGCCGCTGGTTCCGAAAGACCGCCTGCTGGTCGGCGAAAGCGGCATCTTCGCACAGGCCGACCTCGCGCGGCTCGAACGGGTCGGCATCTCCACTTTCCTCGTCGGAGAAAGCCTGATGCGGCAGGCCGACGTCACGGCCGCGACCCGCACGCTGCTGGCGCGGGAGCGCGCGAGTTCCTTAAAGGAAGGATGA
PROTEIN sequence
Length: 273
MADILTKIEAYKREEIAAAKSARPLSEVTAAARAASPPRGFVQAIRAKHARGDYALIAEIKKASPSKGLIRADFDPPALARAYEAGGAACLSILTDAPSFQGRLDFMTASRAATSLPVLRKDFMFDTYQVAEARAHGADCILIIMAALDDAAANDIEAAALDLGMDALLEIHNREELDRALKLHSPMIGINNRNLRTFETTLATSEALAPLVPKDRLLVGESGIFAQADLARLERVGISTFLVGESLMRQADVTAATRTLLARERASSLKEG*