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SCNpilot_cont_300_bf_scaffold_1978_curated_28

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 33549..34301

Top 3 Functional Annotations

Value Algorithm Source
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 250.0
  • Bit_score: 468
  • Evalue 1.30e-129
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 250.0
  • Bit_score: 468
  • Evalue 5.80e-129
Triosephosphate isomerase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMJ6_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 250.0
  • Bit_score: 468
  • Evalue 4.10e-129

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGACCGGGTTGCGACCGCTGATTGCTGGAAACTGGAAGATGAACGGCCTCAAGGCATCGGCCAGCGAACTCGGCCAGATGATCGCAGCCGCGGACGGGCCCGCGCAAAAGGCCGACCTGCTGATCTGTCCGCCGGCGACGCTGGTGCTGGCCTTTGCTGGGGCGGTTCAGGGATCGCCGCTGCGAATCGGTGCGCAGGATTGTCACCCCAAGCCCTCCGGAGCCCATACGGGCGATATCGCCGCCGAGATGATCGCCGATGCGGGCGCGACCGCCGTCATCGTCGGGCATTCCGAGCGGCGCGCCGACCATGGCGAGACCGATGCGCTGGTGCGGCAAAAAGCCGAGGCCGCGTGGCGGGCGGCGTTGATCGCCATCGTCTGCGTCGGCGAAACCCAGGATCAGCGGGATGCCGGCCAGACGCTCGAGGTGGTGGGACGGCAGCTTGCCGGTTCGCTGCCGGATGGCGCGACCGCCGCCAATCTCGTCGTCGCTTATGAGCCGGTCTGGGCCATCGGCACCGGCCGCACTCCGACGCCGCAGGATGTGCAGGAGGTTCATGGATTTATCCGCGATCAGCTCAACCAGCGCTTCAGCGGAGAGGGGAGCAAGGTCCGCATCCTTTATGGCGGTTCGGTGAAGCCGTCGAATGCTGCGGAGTTGCTGGCGGTGCCGAATGTGAACGGGGCGCTGATCGGCGGCGCCAGCCTCAAGGCGACGGATTTTCTGGGGATCGCCCAAGCCGTTGCCTGA
PROTEIN sequence
Length: 251
MTGLRPLIAGNWKMNGLKASASELGQMIAAADGPAQKADLLICPPATLVLAFAGAVQGSPLRIGAQDCHPKPSGAHTGDIAAEMIADAGATAVIVGHSERRADHGETDALVRQKAEAAWRAALIAIVCVGETQDQRDAGQTLEVVGRQLAGSLPDGATAANLVVAYEPVWAIGTGRTPTPQDVQEVHGFIRDQLNQRFSGEGSKVRILYGGSVKPSNAAELLAVPNVNGALIGGASLKATDFLGIAQAVA*