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SCNpilot_cont_300_bf_scaffold_2637_curated_13

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(10719..11984)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 421.0
  • Bit_score: 765
  • Evalue 8.60e-219
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 421.0
  • Bit_score: 765
  • Evalue 3.90e-218
Diaminopimelate decarboxylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHU3_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 421.0
  • Bit_score: 765
  • Evalue 2.70e-218

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCGCCACTTTGATTACCGCGACGGCGTGCTTCACGCCGAGGGCGTCAACCTTTCGACGTTGGCTGACGTCGTCGGCACGCCGTTTTATTGTTATTCGACCGCGACGCTGGAGCGGCACTACCGCGTGTTTGCCGATGCCTTCGCAGGCGTCGACCATCTGATCTGCTATGCCATGAAGGCCAACTCCAATCAGTCGGTGCTGCGGACGCTGGCGAAGCTCGGGGCAGGGGCGGATGTGGTGTCTGGCGGCGAACTCAAGCGCGCGCTGGCGGCAGGAATTCCCCGGGGCAAGATCCTGTTCTCGGGCGTCGGCAAGACCGAAGCCGAACTGCGCGCAGCGCTCGATGCGGACGTTCTCTGCATCAACGTGGAATCCGAGCCCGAACTTGATCTGCTGTCCAGGCTTGCGTCTGAAACCGGGCGCACGGCGCGCATCTCGCTACGCGTCAATCCCGACGTCGATTCCGGCACGCATGCCAAGATCTCGACCGGCAAGTCGGAGAACAAGTTCGGCATCCCAATCGCGCAGGCGCGCGCGGTCTATGCCCGCGCGGCAAAGCTGACCGGCATCGCGATCACCGGCGTCGACATGCACATCGGCAGCCAGATCACCGACCTTGGCCCGATGGAGGCCGCCTTCCGTCTGCTCGCGGATTTCGTCGTTGCGTTGCGCGCCGACGGCCACGCGATCAGCCATGTCGATTTCGGCGGTGGTCTCGGCATCCCCTATTACGAGGACCGCGCCGCCCCGCCGGAGCCACGCGCCTATGCCGATATGGTCAGGCGCGTGACCGGCAATCTCGGCTGCACGCTGGTGTTCGAACCGGGCCGCATGATCGTGGGCAACGCCGGCATTCTGGTGACGCGCGTGATCTACGTGAAGCGCGGCGGGGCGCGTAATTTCGTCATCATCGACGCCGCCATGAACGATCTGATCCGTCCGACTTTGTATGAGGCCTATCACCAGATCATGCCGGTGCGCGCGGCGCCGAAAGACGCGGCGGTGATGGTCGCCGACGTCGTCGGCCCGGTCTGCGAGACCGGAGATTTCCTGGCGCTCGAACGCAATCTGCCGGAGCCGCAAGCCGGCGATCTTTTCGCGATCATGACCGCCGGCGCCTACGGCGCGGTGCAGTCGGGGACCTACAATACCCGCGCGCTGATCCCCGAGGTGCTGGTCAGGGACGATCGGTACGCCGTCGTCCGTCCGCGCATCGAGGTCGAGCAACTCATTGCGATGGATGCGGTCGCGCCCTGGCTCTGA
PROTEIN sequence
Length: 422
MRHFDYRDGVLHAEGVNLSTLADVVGTPFYCYSTATLERHYRVFADAFAGVDHLICYAMKANSNQSVLRTLAKLGAGADVVSGGELKRALAAGIPRGKILFSGVGKTEAELRAALDADVLCINVESEPELDLLSRLASETGRTARISLRVNPDVDSGTHAKISTGKSENKFGIPIAQARAVYARAAKLTGIAITGVDMHIGSQITDLGPMEAAFRLLADFVVALRADGHAISHVDFGGGLGIPYYEDRAAPPEPRAYADMVRRVTGNLGCTLVFEPGRMIVGNAGILVTRVIYVKRGGARNFVIIDAAMNDLIRPTLYEAYHQIMPVRAAPKDAAVMVADVVGPVCETGDFLALERNLPEPQAGDLFAIMTAGAYGAVQSGTYNTRALIPEVLVRDDRYAVVRPRIEVEQLIAMDAVAPWL*