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SCNpilot_expt_300_bf_scaffold_390_curated_20

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(25629..27401)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane component of tripartite multidrug resistance system n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ60_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 590.0
  • Bit_score: 985
  • Evalue 1.80e-284
Outer membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:CCU63446.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 590.0
  • Bit_score: 985
  • Evalue 2.50e-284
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 517.0
  • Bit_score: 651
  • Evalue 3.30e-184

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1773
ATGACACCGACCATGACCAACTTGCGGCGTAAAAAAGAAACCCCTATATCAAGCTTCTGCCGTTCCAGCGCCAGATATGGTGGTTTCCTGCTTGTGGCGGCAGGCTTGACGGGTTGCGCCAATCTCCCTTTTCCTGCATTCGATCTGTCGCCCACTTATAAACCGACCGAATTTGTTGTTCCGGATACCTGGGAGGGAACAAGTGATTTCGTCAAGGCCACTCCGTCGGATGATGCAGTCCGGCCCGACTGGTGGAAACTCTATGACGATCCCGTTCTGAACAACCTCGTAGAGCAGGCGATCGCAGCCAACCCGGACTTGCAGGCAGCGGCTGAACGCTTCATTCAGGCGCGCAATTCCATGATGAAGGCACGGTCCCAATATTTCCCCCAGCTCGGCTTTGGGTTCGGTGGCAGTAATAACAGGCAATCCGACCATACCCTCTTCCGCGCTCCCGGAGAACCTGACAGCGACACCCAGGTTCTGATGAATGGGATTGCATCCTGGGAACCGGACTTCTGGTCGAAACTGCGAAATGCGGCGCAAGCCAAAATCTATCGCGCGGAAGAGCGCGCAGCCGATTATGGGCTCGCGCGCCTTATTCTGCAGGCGGAAGTTGCAACGAATTATTTCACGCTGCGCGGACTGGATGCGCAAATCGCGATCTATAAACAGTCGATCAGCCTTTATAACTACTCATTGGATGTCGTAATGACTCAGTTCGAAGGCAAGATCGCCTCCAATCTCGACGTAGCACGGGCCCAGTCGCTGCTGTTCGCTACCGAGTCGAAGCTGGCCCTGATGAATGCCGATCGCAAGGTGGCGGAGCAGTCCATAGCCATTCTGCTCAATCTTGCTCCAGCCAGCTTCAGGATCGAACCGGTAGATATCCTCCTTTCCGCGAGGTTCAGCCTGCCGCAGACCGTTCCCTCCACGCTACTTGAGCGCCGGCCCGATATTGCCGCAATGGAACGCCAGATGGCGCAGGCCAACCGCGGCATTGGAATAGCACGCGCCGCTTTTTTCCCGGATGTGGCCATCCGGCTCGGAGGAGGAATGGAAGATTCCGGGCTCAATCTGCTCGCACTGGCTAACAGTTTCTGGGCCTATGGGTCTTCTTTTTCCATTCCGCTTTTCCAGGGCGGCTATCGCCGGGCTCAACTGCAACAATCGTGGGCGGTCTATCGCGAGACAGAAAATTTATACCGCTCGACGGTGCTGAATGCCTTTCGTGAGGTTGAGAACAATCTGACCAAGACGCACTGGATGACGATTGCCGCCGAACGGCAGGATGCCGCCGTCGGAGCCGCACGCACGACGCAAAATCTTACCATGGATCTCTACAAGGGCGGTCTGGCTACCAGCCTTGAACTCATTTATGCCCAGCTCGGCACACTGACGGCAAGCATCGATTCCGTACAGATCAAGACCGATCTGCTGAGATCATCGGTGGCGCTTATCCGTGCGCTGGGAGGAGGCTGGAACCGCGATCAATTACCCGCTGACAGTGAAATTCAACCTTTTGGCATATTGCAATATACAAATCTTGACAAGCCTGTACCAGCCGGGGGAATTGATGTCAATGCGGATCCCGCCGATAGAAACATCAAAAACAATAATTTGATGAAACCCCTGATTCCGCTTGAACCTGACAGGGATCAGAATGCCAGAGGCAACAAAAACACCAATTTGATGAAACCACTCGCTCCATATCGGGATCTCAGCGATAGAAACTACAAAAATGACAATTTGTCACAGGTTCTGGTTCCATAA
PROTEIN sequence
Length: 591
MTPTMTNLRRKKETPISSFCRSSARYGGFLLVAAGLTGCANLPFPAFDLSPTYKPTEFVVPDTWEGTSDFVKATPSDDAVRPDWWKLYDDPVLNNLVEQAIAANPDLQAAAERFIQARNSMMKARSQYFPQLGFGFGGSNNRQSDHTLFRAPGEPDSDTQVLMNGIASWEPDFWSKLRNAAQAKIYRAEERAADYGLARLILQAEVATNYFTLRGLDAQIAIYKQSISLYNYSLDVVMTQFEGKIASNLDVARAQSLLFATESKLALMNADRKVAEQSIAILLNLAPASFRIEPVDILLSARFSLPQTVPSTLLERRPDIAAMERQMAQANRGIGIARAAFFPDVAIRLGGGMEDSGLNLLALANSFWAYGSSFSIPLFQGGYRRAQLQQSWAVYRETENLYRSTVLNAFREVENNLTKTHWMTIAAERQDAAVGAARTTQNLTMDLYKGGLATSLELIYAQLGTLTASIDSVQIKTDLLRSSVALIRALGGGWNRDQLPADSEIQPFGILQYTNLDKPVPAGGIDVNADPADRNIKNNNLMKPLIPLEPDRDQNARGNKNTNLMKPLAPYRDLSDRNYKNDNLSQVLVP*