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SCNpilot_expt_300_bf_scaffold_564_curated_3

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 1288..1914

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLT6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 208.0
  • Bit_score: 342
  • Evalue 2.20e-91
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328, ECO:0000313|EMBL:KIO47949.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 352
  • Evalue 3.90e-94
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 207.0
  • Bit_score: 339
  • Evalue 5.80e-91

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGATGGAACTTAAACTCATCAGTGAGAAAGATGGGCAGCCGGACGCGAGCATTCCGGTTTCCGACGCGCTATTTGGCCGTGAATATAATGAAGCCCTGGTGCATCAGGTAGTGACGGCTTATCTGGCCAACGCCCGCAGCGCCAACCGGGCTCAAAAAGGACGTTCGGACGTCGCCAAATCCACTCGTAAGCCATGGCGCCAGAAAGGAACCGGCCGGGCGCGCTCGGGAATGGCATCCAGCCCGTTATGGCGGGGTGGCGGAAAAATCTTTCCCAATAGTCCCGACGAAAATTTTACACACAAGGTCAATCGCAAGATGTATCGCGCCGGCATCGTTTCCATTCTGTCTCAACTGGTACGGGAGGATCGCTTGTCGATAGTGGAAAGTTTCAGCATAGATGCGCCGAAGACCAAAGTGCTGGCGACAAAGCTGAAGGACATGGGGTTGGACGAGGTCATGATTATTACTGACAGTATCGATGAGAACCTCTATCTTTCTTCCCGCAATCTAGCTCGTGTGAGAGTAGTGGAAGCAGGTCACGCCGATCCGGTCAGTCTCATGCGTTTTGCCAAGGTACTGGTGACACGAGGGGCCTTGACTAAAATGGAGGAGATGCTTGCATGA
PROTEIN sequence
Length: 209
MMELKLISEKDGQPDASIPVSDALFGREYNEALVHQVVTAYLANARSANRAQKGRSDVAKSTRKPWRQKGTGRARSGMASSPLWRGGGKIFPNSPDENFTHKVNRKMYRAGIVSILSQLVREDRLSIVESFSIDAPKTKVLATKLKDMGLDEVMIITDSIDENLYLSSRNLARVRVVEAGHADPVSLMRFAKVLVTRGALTKMEEMLA*