ggKbase home page

SCNpilot_expt_300_bf_scaffold_564_curated_7

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 3383..3730

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKC5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 115.0
  • Bit_score: 219
  • Evalue 1.50e-54
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 115.0
  • Bit_score: 219
  • Evalue 2.20e-54
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 115.0
  • Bit_score: 209
  • Evalue 6.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCAAACAACTGCCGTATTACGTGGAGTGAGATTGTCCGAGCAGAAAGGGCGGCTGGTGGCCGATCAGATTCGCGGGCTGCCGGTGGACCGGGCACTTAATCTGCTCGCTTTCAGCCCGAAAAAGGGAGCAGCGATCATACGCAAGCTGCTGGAATCGGCCATTGCCAACGCTGAGCATAATGAAGGTGCGGATATAGATGAATTGAAGGTGTCGACAATATATGTGGATCGGGGACCTTCCATGATGCGAACCAGCGCTCGCGCCAAAGGGCGCGGCAACCGCATTGTCAAGCCGACTTGCCATATCTTTCTTACCGTTGGCGACAAAGTCGGCAACAAAAAATAG
PROTEIN sequence
Length: 116
MQTTAVLRGVRLSEQKGRLVADQIRGLPVDRALNLLAFSPKKGAAIIRKLLESAIANAEHNEGADIDELKVSTIYVDRGPSMMRTSARAKGRGNRIVKPTCHIFLTVGDKVGNKK*