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SCNpilot_expt_300_bf_scaffold_156_curated_27

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 20900..22084

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VNC3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 386.0
  • Bit_score: 472
  • Evalue 3.40e-130
Site-specific recombinase XerD {ECO:0000313|EMBL:EJN07612.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 386.0
  • Bit_score: 472
  • Evalue 4.80e-130
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 389.0
  • Bit_score: 447
  • Evalue 4.90e-123

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGTCGAAATTCAATTTCACCAAGGCGGCGATAGACCAGCTGCCTATTCCTGAGAAAGGCTGGGCCTACTACTATGATCTGAAGGTGCAGGGACTGGGCATAGGGATCGGAACAACCGGCAAGAAGACTTTCATCCTCTACCGCAAAATCGATGGTCGCCCTGAGCGCTTGACCTTGGGCCGCTATCCCGACTTAACCATCGAGCAGGCACGCGGCAAAGCCTCCGAAATCAATTCCGCCATTGCCCAGGGAGCCAATCCCGCACAAGCTAGACGCGGGCGGGAAGCAGAGCTCACCTTCGGCGAACTGTTCAGTCAGTACATCGAGCGCCATGCAAAGCAGAACAAGCGCACGTGGATGGGGGATGAGCAGCGCTTCAGGCAATACCTGCAGAAACCTCTCTCTAAGAAAAAGCTGAGCCAGGTAAACCGCCAGGTTGTTGCATCTCTCCATAGCGATATCACCCTGGCTGGCCGCCCCGTGGTTGCCAACCGCGTGTTGGCGCTGATCTCCAGCGTTTTTGGCTGGGCTGTCTCGGCTGGCCTGTGGGAAGCCAATCCGGTAAGGGGTGTAAGACGCAATAGGGAACAATCCCGTGACAGATTCCTGCAGAGCGACGAGCTTCCTCGATTTTTTCGGGCATTGGCGAAAGAGACAAACGACACCATACGGGACTATTTCCTGCTATCCCTCTTGACTGGCGCACGCCGGGCCAATGTCCTTTCGATGCATTGGGCGGACGTGAACCTGGAACGGGCGGAGTGGCGGCTGAAAACCACCAAGAATGATATCCCCCAGACGGTCACTTTGTCTCCTCAAGCCGTGGAGATACTTCGCAACCGCCTGTCAGCAGATGCTACTGGATTTGTTTTCCCGGGGAGTGGCAAATCAGGGCATTTGGTGGAACCCAAGAAAGGGTGGGAGCGGGTATTGGCTCGTGCCGGCCTTTCCGACCTGCGCATCCATGATCTGCGGCGCACACTGGGTAGTTGGCAGGCAAAGCAGGGAGCAAGCCTTGCCATCATCGGCAAGAGCCTCAACCATAAAAACCAGAACACGACTGCGATATACGCGCGGCTTGACCAGGATCCGGTTCGGGCGAGCGTGAACGCGGCTAACAGCGCTATGCTGATGGCCGGCAGCGCCACTGCGGAAGTGCTGCCGTTTGCCCTGAGAAAAACCTAA
PROTEIN sequence
Length: 395
VSKFNFTKAAIDQLPIPEKGWAYYYDLKVQGLGIGIGTTGKKTFILYRKIDGRPERLTLGRYPDLTIEQARGKASEINSAIAQGANPAQARRGREAELTFGELFSQYIERHAKQNKRTWMGDEQRFRQYLQKPLSKKKLSQVNRQVVASLHSDITLAGRPVVANRVLALISSVFGWAVSAGLWEANPVRGVRRNREQSRDRFLQSDELPRFFRALAKETNDTIRDYFLLSLLTGARRANVLSMHWADVNLERAEWRLKTTKNDIPQTVTLSPQAVEILRNRLSADATGFVFPGSGKSGHLVEPKKGWERVLARAGLSDLRIHDLRRTLGSWQAKQGASLAIIGKSLNHKNQNTTAIYARLDQDPVRASVNAANSAMLMAGSATAEVLPFALRKT*