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SCNpilot_expt_300_bf_scaffold_155_curated_27

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 35674..36474

Top 3 Functional Annotations

Value Algorithm Source
Linocin-M18 {ECO:0000313|EMBL:KCV66620.1}; EC=3.4.-.- {ECO:0000313|EMBL:KCV66620.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 266.0
  • Bit_score: 428
  • Evalue 5.40e-117
Bacteriocin n=3 Tax=Bordetella bronchiseptica RepID=K0MSZ7_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 266.0
  • Bit_score: 430
  • Evalue 1.70e-117
linM18; bacteriocin similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 266.0
  • Bit_score: 430
  • Evalue 5.40e-118

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAATAATCTGCATCGCGAGCTTGCCCCCATCTCCAGTGCTGCCTGGTCGCAAATCGACGAGGAGGTGGCGCGCACCTTCAAGCGCTCCATTGCAGGCCGGCGCGTGGTCGACGTCAAGATGCCCGGCGGTGTCGAACTGGCGGGAGTGGGAAGCGGCCACAAATATGCCATCGCTGCGCCTCAGCCGGATGTCGATGCGAAGCTGCGCGAAGTCAAAGCTCTGGTTGAGCTGACCGTGCCTTTCGAGCTACAGCGGGATGCGATCGACGATGTCGAGCGCGGCGCGAATAATTCCGACTGGCAACCAGCGAAGGACGCGGCGAAGCAGATTGCTTATGCGGAAGATCGGGCGATTTTCGACGGCTACAAGGCTGCCGGGATCGTCGGCATCCGGGAGGCCTCGTCGAATGCGAAGCTTGCATTGCCGGATAACGCCGGCGGCTATCCGGCCGCGATCAGCAAAGCGCTCGAACAATTGCGCCTCGCTGGCGTGAATGGTCCCTATTCCGTCCTGCTCGGCGCCGATGCCTATACGGCGCTCAGCGGGGGGCGCGAGGAGGGGTACCCCATTATCGAGCACATCAGGCGTATCGTTGACGGCGAGGTCGTCTGGGCGCCCGCGCTCGGCGGCGGCAGCGTGTTATCCACCCGGGGTGGAGACTACGAGTTGCATCTCGGCCAGGATCTGTCGATCGGATATGAAAGCCACACCGACAGGATTGTGCGTCTCTATTTGCGCGAGACATTGACATTCCTGATGCTTACCAGCGAGGCGTCGGTATCGGTGATGCCACAATGA
PROTEIN sequence
Length: 267
MNNLHRELAPISSAAWSQIDEEVARTFKRSIAGRRVVDVKMPGGVELAGVGSGHKYAIAAPQPDVDAKLREVKALVELTVPFELQRDAIDDVERGANNSDWQPAKDAAKQIAYAEDRAIFDGYKAAGIVGIREASSNAKLALPDNAGGYPAAISKALEQLRLAGVNGPYSVLLGADAYTALSGGREEGYPIIEHIRRIVDGEVVWAPALGGGSVLSTRGGDYELHLGQDLSIGYESHTDRIVRLYLRETLTFLMLTSEASVSVMPQ*