ggKbase home page

SCNpilot_expt_300_bf_scaffold_111_curated_29

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(38067..40184)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD6_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 685.0
  • Bit_score: 1030
  • Evalue 0.0
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 685.0
  • Bit_score: 1030
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:ABB73935.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 685.0
  • Bit_score: 1030
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
ATGGCGGACGGTGGGTCCGCTCAACAAGAAAATTCCATGGGTCCGTGCAAAAAAATAATCTGGATGGTTTTGACCATCCCTGGCTGCTCACTGCCTGTCTGTCTACTTGCGGCTGAATCGGAAGAAAAATTCGGGAAGCCGCTGGAGGAGGTGGTGGTAACGGCAACACGATTCACCCAGCGTGTGGAGCAATTGCCCATAGGGGTCTCCATTATCAGCGCGGAGCAGATAAAGAATAGTTCTGTATCCACCCTGCCGGAATTGCTGCAGCAATTGGCCGGAATTCATACCCGCAACCTGGACGGAAGTCCTGACCCGCAAATCGATATGCGGGGATTTGGCATTACGGGCAACGAGAACACCCTGGTGCTGCTCGATGGCCAGAGGATGAACGAAAAGGAACTGGTAGGCATACGCTGGTCCACTATTCCGCTGGATTCCATAGAACGCATCGAGGTGCTGCGCAATACCGGGGCGGTTACCTATGGGGGTGGTGCGACCGGCGGGGTGATCAATATCGTGACACGGGCAGCTCCGAAGCAGCGTATTTCGGGGAGCGGGGGAATCTCCATTGGAAGCTATAGCGCGACTGAATTCAATGGCGCACTCAATGCGGCAGGAAAAAACCTTGCGCTGGCACTGACCGCCAATGCCCTGGAAACGGACAATTATCGCGTCAATAATGTTTTGCATCAAAAAAATCTTCAGGGCGACCTGCGCTATACGTTCGGGCCAAATGGCAGGACTCTGGTAAAGTTTGGCCTGGACGATCAAAAACTGGGATTGCCGGGCACGCGTACCGAAGCGCAACTGGAAACTGACCGAAGGGGAACCTCAAGACCGCGGGATTTCAGCACCCGCCAAGGAGCCTACGTCACCATGAGGGCGGAGCATACTGTTGGCATGGGTGATCTCGCCGCGGACCTGTCTTATCGAAACATTCACCGCACGGCGTTGTTCGATGACTACGCTATCGACTTTTTCAATTCCAAAACATTTATCAACACCCGTTCGGATGTATGGCTGTTCAATCCGCGTTTCAAGATGCCTTTCCAGGGCATGGGGCTGAATCATGAACTGGTGCTGGGGGCCAATCTGGAATGGTGGGATTATCATTCCAGGCGTTTCACCGGAGCGGAGACGGTACCGGGCGCCCTGTCGGCAAACATTCAGCAAACCGATGTGGTTGCGACCCAGCAGAACCGGGCCGTTTACCTGCAGCATATCGCGACTTTCCCGACGGATACGGTGCTGACGCTGGGCGGGCGCGCACAATGGGTACACAATAATGTCAACGATCGTTTCAACCCCGCGGCTTATGCCAGGGGGCGGCAGGACCGGCTGGTCTACGCCTACGATGTGGGGCTGCGCCAGCCCTTTAAGACGGTTTTCTCGTTTTATGGAAAATTTGGACGAAGCTTCCGTATCGCAACGGTGGACGAAACCTATAATCAGTTTGGCGGCCCCTCGTTCGATTCGGCTGTCAAGCTGCTGGAACCGCAAACTGCGCATGCCGCTGAAATCGGCCTGGAATATCAGGAAGGACCCGTTCGGACGCGCGCGTCGCTGTACAGGATCAATCTCAATAATGAGATCAGCTTCATCAATATCGATCCTTTCCTGTTTTTTTCCAATATAAACCTGCCTCCCACGCGGCGACAGGGGGTCGAGCTGGAAGGTTCCTGGGCCGTCACAAGAGCGATAGATATATTTGGCAATTATACTTATAACGATGCGCGTTTTCGCGAAGGCACTTTCGGCGGGGTCGACGTTGCGGGAAACATCATTCCGCTGGTGCCTCGCCATAAGGTTTCGGCCGGCGGCACGGTGCGGTTTACCGATAACACCCGTTTTGCAACAGCCATGAACTATATAGGCGAACAGGTATTCGATAATGACCAGGCTAATACCGCGTCGCGGCGGATGCCGAATTATGTGACGGTCGACCTGAAGCTCACACACCAGATGAACAGGCTCCTGATCAGCATGGCCGTCAACAATTTATTCGACGAGAAATATTTTTCATACGGTATCCGCAATGCATCGGGCACGAGCTTCAATGCGCTTCCGGCGCGTGAGCGCAATATCTGGATTACCTTGAAATATCAATTTGATTAG
PROTEIN sequence
Length: 706
MADGGSAQQENSMGPCKKIIWMVLTIPGCSLPVCLLAAESEEKFGKPLEEVVVTATRFTQRVEQLPIGVSIISAEQIKNSSVSTLPELLQQLAGIHTRNLDGSPDPQIDMRGFGITGNENTLVLLDGQRMNEKELVGIRWSTIPLDSIERIEVLRNTGAVTYGGGATGGVINIVTRAAPKQRISGSGGISIGSYSATEFNGALNAAGKNLALALTANALETDNYRVNNVLHQKNLQGDLRYTFGPNGRTLVKFGLDDQKLGLPGTRTEAQLETDRRGTSRPRDFSTRQGAYVTMRAEHTVGMGDLAADLSYRNIHRTALFDDYAIDFFNSKTFINTRSDVWLFNPRFKMPFQGMGLNHELVLGANLEWWDYHSRRFTGAETVPGALSANIQQTDVVATQQNRAVYLQHIATFPTDTVLTLGGRAQWVHNNVNDRFNPAAYARGRQDRLVYAYDVGLRQPFKTVFSFYGKFGRSFRIATVDETYNQFGGPSFDSAVKLLEPQTAHAAEIGLEYQEGPVRTRASLYRINLNNEISFINIDPFLFFSNINLPPTRRQGVELEGSWAVTRAIDIFGNYTYNDARFREGTFGGVDVAGNIIPLVPRHKVSAGGTVRFTDNTRFATAMNYIGEQVFDNDQANTASRRMPNYVTVDLKLTHQMNRLLISMAVNNLFDEKYFSYGIRNASGTSFNALPARERNIWITLKYQFD*