ggKbase home page

SCNpilot_expt_300_bf_scaffold_141_curated_3

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(688..2007)

Top 3 Functional Annotations

Value Algorithm Source
Permease of the major facilitator superfamily n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHG1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 416.0
  • Bit_score: 701
  • Evalue 5.10e-199
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CCU61927.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 416.0
  • Bit_score: 701
  • Evalue 7.10e-199
major facilitator transporter; K06902 MFS transporter, UMF1 family similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 432.0
  • Bit_score: 673
  • Evalue 6.10e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGCTCGAAATGATGGAAGGCAGTATCTGGCGGAGGGCGTGAGCGGACGGGAAGCCTGGTCATGGGCGATGTTCGATTTCGCCAATTCGGGTTATACGACAGTCGTCATTACTGCTATTTTCAATGCTTACTTCGTGGCCGTGGTGGCGGAGGGTAAGGAATGGGCAACGTTCGCCTGGACGGCTTCGCTTGCGGTTTCGTATGCGCTTATCGTGCTGACCGCTCCGGTACTTGGAGCCTACGCCGATGCTTATGCCGCGAAAAAGCGCCTGCTTGTTTTCAGTACCATCGGCTGCGTGATATTCACTGCGCTGCTGTCTTTGGCCGGGTCCGGCGAGCTCTGGCTGGCTATAGTCTTTCTTGTCTGTTCCAATTTCTTTTTTGGCTGCGGCGAAAATCTCATTGCCGCATTTTTACCGGAGTTGGCGCGGGGCAAGGCGCTGGGGAAGGTGTCCGGTTGGGGCTGGAGTCTGGGATATCTGGGTGGGCTGGTCAGCTTGGGCTGTTCGCTCGCCTACGTAACCTGGGCGCAGGGCGCGGGTAAGACAGCGGAAGAGTTTGTTCCCGTCACCATGCTGATTACCGCCGGCCTGTTCGCCGTTTCCAGTATTCCGACTTTTTGTTATTTGAAGGAACGGGCGCTGCCTCAGCCGCATTTTCCGGGACGAAATATCATGCTGGAGGCATTCTCCCGGCTGGGCCATACGCTTCGTCACGTGCAGGATTACCGGGACTTGGTGCGTTTTCTTGCCTGCCTGGTGTTTTATCAGGCCGGCATTCAGGCGGTGATTACTCTGGCGGCGATATATGCGCAGCAGGCGATGGGTTTCAGCACCAGCGACACCATGTTTCTGATTCTTGTGGTTAACCTTACGGCGTCCGCGGGGGCTTTCTCTTTCGGTAACCTGCAAGACAGAATCGGCCATGTGCCGACCATTGCGCTGACCCTGGTGGGTTGGATTGTCATGATTCTGCTAGCCTGGATGGCCGAGAGCCGCATGATGTTCTGGGCAGCTGCCAATTTGGCAGGGTTATGCCTGGGAGCTTCGCAATCCGCGGCGAGGGCGCTGGTAGGCTACTTCAGCCCCGATACACGCCGAGCGGAGTTTTTTGGCCTGTGGGGACTTGCGGTAAAGCTCTCGTCGATACTGGGCCCGCTGACGTATGGCGTAGTAAGCTGGGTTTCGCAAGGCGATCACCGTCTCGCCATGCTGATCACTGGCATTTATTTCATCATTGGCCTGATGATATTGGCGGGAGTGGATGTACAGCGAGGCCGTCGTGCCGCGCTGCATCCAGATGCTTTCCCGGACAGCTGA
PROTEIN sequence
Length: 440
MARNDGRQYLAEGVSGREAWSWAMFDFANSGYTTVVITAIFNAYFVAVVAEGKEWATFAWTASLAVSYALIVLTAPVLGAYADAYAAKKRLLVFSTIGCVIFTALLSLAGSGELWLAIVFLVCSNFFFGCGENLIAAFLPELARGKALGKVSGWGWSLGYLGGLVSLGCSLAYVTWAQGAGKTAEEFVPVTMLITAGLFAVSSIPTFCYLKERALPQPHFPGRNIMLEAFSRLGHTLRHVQDYRDLVRFLACLVFYQAGIQAVITLAAIYAQQAMGFSTSDTMFLILVVNLTASAGAFSFGNLQDRIGHVPTIALTLVGWIVMILLAWMAESRMMFWAAANLAGLCLGASQSAARALVGYFSPDTRRAEFFGLWGLAVKLSSILGPLTYGVVSWVSQGDHRLAMLITGIYFIIGLMILAGVDVQRGRRAALHPDAFPDS*