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scnpilot_p_inoc_scaffold_1311_curated_1

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 124..651

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination factor NusG n=3 Tax=Parabacteroides RepID=A7AFP3_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 168.0
  • Bit_score: 182
  • Evalue 4.10e-43
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:CDD14761.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 168.0
  • Bit_score: 182
  • Evalue 5.80e-43
nusg antitermination factor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 154.0
  • Bit_score: 173
  • Evalue 4.60e-41

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Taxonomy

Parabacteroides merdae CAG:48 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
ATGCAGGAACGCTCTCAACCACTCATGTTAAAAAATCCCCGGCGCTGGTATGCTCTTTATACCACACCACGATCCGAGAAACAGGTGCATCAACGATTGCAGTTGGCTGGGATTGAGGTGTTTTTACCGATACATAGTGCACCTCGAAAGTGGTCCGATCGGATTAAATATGTCGAAACACCGCTTTTTTCTTCCTATATATTTGTTCGGACCACCGAATTGCAGCTTCGATCGTTGCTGAAAGTGAACGGGGTGGTTCGTATTGTGTTTCATGCCGGTGCTCCTGCTGTTATTCGCGACCGCGAAATAAATGCCATTCGTGATTTTCTGGAAAAAGCCCGCGAGAAAGAACTGATGTACGAAATAGGCCAGGAGCTCCTGATTGCTTGCGGTCCTTTGAAAGACATCTCCGGAAAAATAAAAAAGATCAATAAAACACAGTTAATCTTACACCTCGAACAATTGGGATGTACTGTTGCGGTGAAAATCGATCAGGTTGTAAAAAAGAGAATCCCGGTTATAGATTAA
PROTEIN sequence
Length: 176
MQERSQPLMLKNPRRWYALYTTPRSEKQVHQRLQLAGIEVFLPIHSAPRKWSDRIKYVETPLFSSYIFVRTTELQLRSLLKVNGVVRIVFHAGAPAVIRDREINAIRDFLEKAREKELMYEIGQELLIACGPLKDISGKIKKINKTQLILHLEQLGCTVAVKIDQVVKKRIPVID*