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SCNpilot_cont_1000_bf_scaffold_48_curated_17

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16307..17647)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034589C6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 446.0
  • Bit_score: 871
  • Evalue 4.90e-250
Fis family transcriptional regulator {ECO:0000313|EMBL:ESH88438.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 460.0
  • Bit_score: 560
  • Evalue 2.00e-156
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 442.0
  • Bit_score: 508
  • Evalue 2.60e-141

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Taxonomy

Cupriavidus sp. HPC(L) → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
GTGATCCCAGACAGCTTGCGCGTGCTGCTCGTGGAGGATGACGCGGCAGTGAGGCTCGGTACTGTCCAGGCGTTGCAGCTAGCGGACATCGAGGTCGACGCGTTTGGAAGCGCCGAGGAGGCGCTTGAGCACATCGACGGCGATTTTCCGGGTATTGTCGTCAGCGATGTGCGTCTGCCCGGCATGACGGGACTCGAACTGCTCGAACGCGTGAAGGCAATGAGCGCGTCGATGCCAGTCATTCTCGTGACCGGGCACGGCGACATCGCGATGGCGGTACAGGCCATGCGCCTCGGCGCTTACGACTTCGTTGAAAAGCCGTTCGCGTCGGAGCGGATCGTCGAGCTTGCGCGACGTGCGCTCGAGCACCGACGGCTTACGCTCGAACTGACGGCCGTGCGCAGGCAGCTCGAGAGTCGTGATCGTATCGATGCGAGGATCCTCGGGAATTCGCGACCCGTGGAGCATTTGCGCAAGCTGATCCTCGAACTGGCCAATACCGATGCGAACGTGCTGGTGTTCGGCGAGACGGGCACCGGCAAGGAACTGGTTGCGCGCTGCCTGCACGACTTCGGCCCGCGCCGCGACAAACCCTTTGCCGCGCTGAACTGCGCGGGCCTTCCCGAATCGCTATTCGAGAGCGAAGTGTTCGGCCATGAGGCTGGCTCGTTCACGGGGGCGTTGAAACGTCGCATCGGCAAGCTGGAATATGCGCAGGCCGGCACGCTCTTTCTCGACGAGATCGAGACGATGCAGATGGCACTTCAGGTCAAGTTCCTGCGTGTGCTTCAGGAGCGCCAGTTCGAGCGGATTGGCTCGAACGAACTGCTGCCGATGAATTGCCGGATCATTGCCGCGACGAAGGCGGATCTGCTCGAGCTCGCCCGCCAGCAGCGGTTTCGCGACGATCTCTACTATCGGCTTGGGGTGATCGTGCTCGAGATCCCCTCGCTACGGGAGCGTCGGGAAGACATTCCGCTGCTGTTCGAGCACTTTGTGCTGCGGGCGGCGGCGGCGTACGGTCGTCCGGTGCCGGAGATCGGCGCCGAGCGTCTGAATCGGCTGATGGCGCGCCCGTGGCCCGGAAACGTGCGCGAACTGTGCAACGTCGCCGAGCGCTTTACGCTCGGACTCGGGACCGGAGATCCGGACGACGGCCCGCAGGGGACGCCGCGCACGCTCGACGAGCAGATGAACCTGTTCGAGCGGCGTTTCATCGAAGAGGCGTTGCGCGCGTCCGGCGGACGCGCATCGCTCGCTTGCGAAAAGCTGGGCATTCCCCGAAAGACCTTGTACGACAAGATGCGGCGCCTCGGCATCGCGTCCGATGATTTCAAGTGA
PROTEIN sequence
Length: 447
VIPDSLRVLLVEDDAAVRLGTVQALQLADIEVDAFGSAEEALEHIDGDFPGIVVSDVRLPGMTGLELLERVKAMSASMPVILVTGHGDIAMAVQAMRLGAYDFVEKPFASERIVELARRALEHRRLTLELTAVRRQLESRDRIDARILGNSRPVEHLRKLILELANTDANVLVFGETGTGKELVARCLHDFGPRRDKPFAALNCAGLPESLFESEVFGHEAGSFTGALKRRIGKLEYAQAGTLFLDEIETMQMALQVKFLRVLQERQFERIGSNELLPMNCRIIAATKADLLELARQQRFRDDLYYRLGVIVLEIPSLRERREDIPLLFEHFVLRAAAAYGRPVPEIGAERLNRLMARPWPGNVRELCNVAERFTLGLGTGDPDDGPQGTPRTLDEQMNLFERRFIEEALRASGGRASLACEKLGIPRKTLYDKMRRLGIASDDFK*