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SCNpilot_cont_1000_bf_scaffold_48_curated_31

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 33741..34406

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003492F82 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 221.0
  • Bit_score: 434
  • Evalue 7.60e-119
Membrane protein {ECO:0000313|EMBL:KHQ92884.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 221.0
  • Bit_score: 434
  • Evalue 1.10e-118
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 223.0
  • Bit_score: 352
  • Evalue 1.20e-94

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAATAAATTCGCTAAGCTCGCGATCGTTGCAGCTACCGCAGTGATGGCTGCTTCGGCTATGGCTCAAAATTATGTCCAGACCGCTCCGGGTCCGATCGCGGCCTCGAAACAAGCTGTCAACGACAACTGGGTTAACGGCAGCGGCGAGTGGGTTTGGAAGAACGGCTCGGACGAACTGTGCTGGCGCGATGCCTACTGGACCCCGGCCACGGCCAATGCCAAATGCGATGGTTCGATCATCGCCCAGGCACCGGCTCCGGCACCGGCTCCGGTTCCGGTCGCTCCGGTTTCGCAGAAGGTGACGTACCAAGCTGACGCCCTGTTCGATTTCGACAAGGCCATCCTGAAGCCGGAAGGCAAGGCCAAGCTGGACGACCTGGCTGGCAAGGTTCAAGCACTGAACCTGGAAGTCGTGGTTGCCACGGGCTACACCGACCGCATCGGTTCGGACAAGTACAACGACCGTCTGTCGCTGCGTCGCGCTCAAGCTGTGAAGGCCTATCTGGTCAGCAAGGGCGTTGAAGCCAACCGCGTCTACACGGAAGGCAAGGGCAAGCGCAACCCGGTCACGACCGGTTGCAACCAGAAGAATCGCGGTCAGCTGATCAAGTGCCTGGCACCGGATCGCCGCGTGGAAGTCGAAGTCGTCGGCACGAACAAGTAA
PROTEIN sequence
Length: 222
MNKFAKLAIVAATAVMAASAMAQNYVQTAPGPIAASKQAVNDNWVNGSGEWVWKNGSDELCWRDAYWTPATANAKCDGSIIAQAPAPAPAPVPVAPVSQKVTYQADALFDFDKAILKPEGKAKLDDLAGKVQALNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKAYLVSKGVEANRVYTEGKGKRNPVTTGCNQKNRGQLIKCLAPDRRVEVEVVGTNK*