ggKbase home page

SCNpilot_cont_1000_bf_scaffold_47_curated_26

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25233..26051)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034798A8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 541
  • Evalue 4.20e-151
ABC transporter permease {ECO:0000313|EMBL:AJE99518.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 272.0
  • Bit_score: 534
  • Evalue 1.20e-148
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 270.0
  • Bit_score: 462
  • Evalue 1.30e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGCGTAATCGTTCGATCATGCGGCACTTGCGGTTGTGGCAATGGCTGCTGCTGGTAGTGGCTTTTCTCGTCTGGTATGTCCTCACGAGCCCGACGCTGCTCCCCGCGTTCTACTTCGACAGCCCCGACAAGGCGGCTTTCTTCTTTGGCGAGCCGCAGAAGGTATTGCTCCAGATCTGGCAGTGGTTCGCCGGCGGGGAGATCTATCTGCATCTCGGCGTCACGCTGCTCGAGACCGTGCTCGCCTTTGTCATCGGCACGGTGTTCGGGCTGGCGGTGGGACTGTGGCTGGCGCTCTCGCCGAGCGCGGGCGCGCTGTTCGATCCGTACATCAAGGCGGCCAACTCGATGCCTCGCGTGATTCTCGCGCCGATCTTCGGCGTGTGGTTCGGGCTTGGCATCTGGTCGAAAGTCGCGCTGGGTGTAACGCTGGTGTTCTTCATCGTGTTCTTCAACGTGTACCAAGGCGTAAAGGAAGTCAGTCCGGTCGTGCTGGCGAATGCCCGCATGCTGGGCGCGAATCAGCGGCAGTTGCTGCGTCGCGTGTATCTGCCGAGCGCCACGAGCTGGGTGTTCTCCAGCCTGCACAACTCGGTCGGACTCGCGTTCGTCGGGGCAGTGGTCGGGGAGTATCTGGGGTCGGCGCGCGGCGTGGGCTACCTGATTCTGCAAGCGGAAGGCACGTTTGACATCAACGCCGTGATTGCCGGCGTCTTGATCCTGACGGCGTTTGCCCTCGTGCTCGACGGGCTCGTCGGTGTGGTCGAACGGCGTTTGCTCGTCTGGCAGCCGCAGGCCGGCGAGACCGAGAAGATGTGA
PROTEIN sequence
Length: 273
MRNRSIMRHLRLWQWLLLVVAFLVWYVLTSPTLLPAFYFDSPDKAAFFFGEPQKVLLQIWQWFAGGEIYLHLGVTLLETVLAFVIGTVFGLAVGLWLALSPSAGALFDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANQRQLLRRVYLPSATSWVFSSLHNSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINAVIAGVLILTAFALVLDGLVGVVERRLLVWQPQAGETEKM*