ggKbase home page

SCNpilot_cont_1000_bf_scaffold_40_curated_5

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4440..5819)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003452BCD similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 459.0
  • Bit_score: 901
  • Evalue 4.60e-259
Multidrug transporter MatE {ECO:0000313|EMBL:KHQ94131.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 458.0
  • Bit_score: 787
  • Evalue 1.30e-224
matE; Multi antimicrobial extrusion protein MatE similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 442.0
  • Bit_score: 431
  • Evalue 3.20e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTCTCATTCCACTCTTCATCAATCCACGCAGGGCACAAGGACGCCGCTGCTCAAACAATTTACGTCGCTCGCGATTCCAACCATTCTTTCCGGCTGGGTATACACGGTCTACACGTTGATCGACGGGATCTTCATCGGTCGATACGTCGGCGAACAGGCGTTGGCAGCGCTCAATCTCGTGGTCCCGTTGCTGTATGTCCCGTATGCGTTCAGTGTCATGATCGGTGTGGGCGGCGCCACGCTCATTGCCCGCTTGTTGGGAGAGGGACGCGACGCACAGGCGCGTCGCGCATTCTCGCAGGTGCTCTGGGTGATGCTCGCCTTCAGTATCGCGATGAGCGCCGGGGTGCTGTCCTTCCGTCACGAAATCGCCGCCGCGCTCGGCGCACACGGCGAAATTACACAACACGTGGTGGGCTTTCTGTCCGGCTGGGGCTGGTTCGTGCTTTTCGCGAACGGTCTTTACGCGATGGAGCTGTTCCTGCGCGTGGAAGGCGCGCCGGCGGCGCGATTCGGACTGTACGCGATGTTTCTTGGCGCGCTCGCCAATGTGGCGCTGGACTATTGGTTCATCGTGGTGAAGGAGATGGGCATGTACGGGGCGTCGCTCGCCACCGGCTTGTCGATGATGGTCTCCAGCAGCGTGATGCTCGCCTATCACTTCGTGCTGGCCAAGAAGGTCGTGCCTGCATGGCGGGCTTTCGCAGACACCGAAGTCCATATCTGGCGCATGATGTACAACGGCGCCTCGGAGTTTCTGGGGGCGATCGCCCCGGCGGTGACCGTGTTCGCGTTCAATCGCGTCATTCTGTGGAACTTTGGCGAGCCCGGGCTGGCCGCCTACGCCATTCTGGAATACATGACGCTCGGTGCCACGGTGACGATGGTGGCGCTCGTGCAAAGCATGCAGCCGATGATCAGCTTCTACCATGGTTCGCGCGATCTGAACGCGTTGCGCGAGTCGTTCCGGCTCGGCGTCATGGCGGTGATGGGGTTCTCGGTGCTGGTGGCTGTCGCCATGGCTACACTGGCTCGCCCGCTGACGTTCCTGTTCTTGCCGGCAGGCGTTCAGGCGTGGTCGATTCTCGAGCACGCGGTGCTTTGGTACGCGCTGGCGTTTCTGCCCGCAGCCGGCAATTTGATCGTGGCGGGCTTTCTGACGGCCGTGGAGTCACCGGGACCGTCGGCGGCCATTGCCATGCTGCGAAGCTGGGTGTTACTGCTGGGCATTCTTTGGCTGCTCAATGTTGGGTTCGGCGGCGCGGCGATCTGGTACACGCTGTTGATCACTGAAATGCTGACGCTTGCCATCAGCGTCTGGCTATATTGGCGCAGTGACCGAGGCGACGCGCTCTTGGCGCGCGCAGCGTCGCGCTGA
PROTEIN sequence
Length: 460
MSHSTLHQSTQGTRTPLLKQFTSLAIPTILSGWVYTVYTLIDGIFIGRYVGEQALAALNLVVPLLYVPYAFSVMIGVGGATLIARLLGEGRDAQARRAFSQVLWVMLAFSIAMSAGVLSFRHEIAAALGAHGEITQHVVGFLSGWGWFVLFANGLYAMELFLRVEGAPAARFGLYAMFLGALANVALDYWFIVVKEMGMYGASLATGLSMMVSSSVMLAYHFVLAKKVVPAWRAFADTEVHIWRMMYNGASEFLGAIAPAVTVFAFNRVILWNFGEPGLAAYAILEYMTLGATVTMVALVQSMQPMISFYHGSRDLNALRESFRLGVMAVMGFSVLVAVAMATLARPLTFLFLPAGVQAWSILEHAVLWYALAFLPAAGNLIVAGFLTAVESPGPSAAIAMLRSWVLLLGILWLLNVGFGGAAIWYTLLITEMLTLAISVWLYWRSDRGDALLARAASR*