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SCNpilot_cont_1000_bf_scaffold_40_curated_10

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11359..12297)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI000349EC4E similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 627
  • Evalue 6.60e-177
LysR family transcriptional regulator {ECO:0000313|EMBL:AJC22226.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 311.0
  • Bit_score: 616
  • Evalue 1.60e-173
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 308.0
  • Bit_score: 544
  • Evalue 3.00e-152

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Taxonomy

Pandoraea pulmonicola → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGCCAGAACCGCGAACCGATTGACACTTATTTGCTGCGCGTCCTTCATACCTTGTTGATCGAGCGCAGCGTGACGCGCGCGGCCGTCAAGCTGAACCAGTCGCAGCCGGCGATCAGCGCGGCGCTGCGGCGGTTGCGCGACATCACCGGCGATCCGCTGCTGGTGCGCGGCAAATCGGGCATGGTGCCCACGGAGTACGGTCAATCGCTGCTGGAGCCCACACAGAACGCGTTGCGCGAGATTGAGCGCATCACGGTTCAGCAATCGAATTTCGATCCGGCGACGACGGTACGCACGTTCCGCATCGGCTCGCCCGACTATCTGAATACGCTATTCGTACCGACAGTCGTCGAGCGCTTTCGCCAGCAGGCACCCAACGCCCAGCTCGAACTCCATTCGCTGGGGCCCGCCTTCGACTATGAGCACGCCCTCGAAGACGGCAAGGTCGACATCGTGATCGGCAACTGGCCCGAGCCGCCGGAGCAGCTTCACCTCTCGAACTTGTTCGTCGATCAGATCGTCTGCCTGGTGCGCAATACGCACCCCTACGCCAAACGCGGCCTCACACTCGACCAGTATCTCGCCAGCCCGCATCTCGCTCCGACGCCCTATTCCGTTGCGCAACGCGGCGCCATCGATATGCACCTCGCGCGCGAGCGCCTGAAGCGCAATGTGGTCGTGACGATTCCGTATTTCAATCTGGCGCCTTACGTTTTGCTCAAATCCGATCTGATCTTCACCACGACGCGCCTGTTCGCCGACTATTACGCCGAGTTTCTGCCGCTCACCGTGCTCGAAGCGCCCATCGACTTCCCGCCGATGCAGTATTACCAGTTGTGGCACGAACGCACGCACTATTCGGATGAGGTGCGCTGGCTACGCAGCGTCATTTCCGACGCCACGCGGACGTTGCTTGAGATGCGCCCCCAGACCTAG
PROTEIN sequence
Length: 313
MSQNREPIDTYLLRVLHTLLIERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKSGMVPTEYGQSLLEPTQNALREIERITVQQSNFDPATTVRTFRIGSPDYLNTLFVPTVVERFRQQAPNAQLELHSLGPAFDYEHALEDGKVDIVIGNWPEPPEQLHLSNLFVDQIVCLVRNTHPYAKRGLTLDQYLASPHLAPTPYSVAQRGAIDMHLARERLKRNVVVTIPYFNLAPYVLLKSDLIFTTTRLFADYYAEFLPLTVLEAPIDFPPMQYYQLWHERTHYSDEVRWLRSVISDATRTLLEMRPQT*