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SCNpilot_cont_1000_bf_scaffold_262_curated_15

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10412..11743)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AF77E similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 443.0
  • Bit_score: 884
  • Evalue 5.60e-254
Type-III secretion protein {ECO:0000313|EMBL:EON13707.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 446.0
  • Bit_score: 633
  • Evalue 2.40e-178
type-III secretion protein; K03220 type III secretion protein SctD similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 438.0
  • Bit_score: 182
  • Evalue 3.30e-43

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGAGCATGCTCACGCTCACGCTGCTCGACGGCCCCCTCGCCGGACGCCCCATGCCGCTACCACCGGGCACACTCACGATCGGCGACAGTGATTCCGATATCGCGATGACGCTCGATCATGGCGCCCAGATCGCGCTGGGCGTCGACGACGATGGCGTTCGCCTGCTCACGCCGGCGCCAGTCTGGGTCGACGGCGTGCCCGTCGCCGCATCGGATGATCGCGCGGCCGACACGCTCAGGCTCCCGCTGCATACGGCGATCGATCTTGCCGGCCTCGGCATCTGGCTCGGCGACGGCAGCGAAAGCGCTCCCGCGCCCATGCCAAAACGTCCAGAGCGGCGTCCCGAGCACACGGCATCGCCTCGCATGACCCTCGCGCCCGAATCCCCCCAAGCGGCCGAAGCCCCTGCGCGGCGCGCTCGCGCCCAGACCGCCTGGATCGCAGTCACGGGACTATCGCTACTGATCGCGGCGGCGGGCGTCGCGATCTGGCGCACGGGAACCGCCAACGTCATCGCCGCGCCGCCACCGCCCGATGCGCTCAAAGCGCTCGCGGCACGCGTCGCGCCCCGCGTCGTGCTGGATCACAGCGGCAATGCGGTACGCCTGTCCGGTGGCTGCATCGACGACGACGCGCTTGCACGACTGCGCGCCGAGGCGCGTTGGCTGGGCAAAGCGTTGAGCGACGAGACCTGGTGCCCCGCGAATTCCATACAGACAGTGCGCACGTTGCTACGCTTGCACGGCTTCGGTACCGCACAGGTGAGCGTCACGCCGGACGGCGAAGTGCTCATCGGTGCGCCGACGGTCGCCGACGCCCGCTGGCGCTCAGCCGCCAACGCGCTCGATGCATTGGCGCTGCCGCATGGCTGGCGCGTGGCAGAAGGCACGGCCAACAGCTTCGAGCGGCTGTTGAAGACGCTACGCGACGCCGGCCAGTTGCGCGGCATCGATATCGCACGCGATCGCAACGGATGGCGGCTTACCGGGGCACTGACCGTGGGACGCCAAGCGTCGTTGAAGGGGATCGTCGACACATGGAACACCGGTGACAACGCGATGCCGGTGCGCATCGAGCCGCTTCCGCCACAGATCCCGACGCTGGTCGAAACAGGCTTTTCCGCGCCGCTCGTGAGCATAGGTGGCTCGCCCAACGCGCCGCAGATCACCCTCGCCGACGGCACGCGCCTGGCGCAGGGGGCGCGTCTGCCCGGCGGCACACGCGTGATCGCGATTCATACGGGCGGCGTGTCGATCGGCTCGCACGACCGGCTTTTCTACTTACCCCTGTCTCCGGAGACGCTGTATGACGATTCGCCTGACCCAGCTTGA
PROTEIN sequence
Length: 444
MSMLTLTLLDGPLAGRPMPLPPGTLTIGDSDSDIAMTLDHGAQIALGVDDDGVRLLTPAPVWVDGVPVAASDDRAADTLRLPLHTAIDLAGLGIWLGDGSESAPAPMPKRPERRPEHTASPRMTLAPESPQAAEAPARRARAQTAWIAVTGLSLLIAAAGVAIWRTGTANVIAAPPPPDALKALAARVAPRVVLDHSGNAVRLSGGCIDDDALARLRAEARWLGKALSDETWCPANSIQTVRTLLRLHGFGTAQVSVTPDGEVLIGAPTVADARWRSAANALDALALPHGWRVAEGTANSFERLLKTLRDAGQLRGIDIARDRNGWRLTGALTVGRQASLKGIVDTWNTGDNAMPVRIEPLPPQIPTLVETGFSAPLVSIGGSPNAPQITLADGTRLAQGARLPGGTRVIAIHTGGVSIGSHDRLFYLPLSPETLYDDSPDPA*