ggKbase home page

SCNpilot_cont_1000_bf_scaffold_262_curated_21

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 17480..18844

Top 3 Functional Annotations

Value Algorithm Source
type III secretion system ATPase (EC:3.6.1.14); K03224 ATP synthase in type III secretion protein SctN [EC:3.6.3.14] similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 452.0
  • Bit_score: 495
  • Evalue 2.30e-137
  • rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346D408 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 454.0
  • Bit_score: 879
  • Evalue 1.80e-252
Type III secretion system ATPase {ECO:0000313|EMBL:EON13713.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 457.0
  • Bit_score: 812
  • Evalue 3.00e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGCGTCGCCCGGACGCCACACGCATCGCCAATGGGCTTCGTCGAACGCTCGACGCGCGGCGCAAGGCGTGTGACGAGTGGCGGCGGATGTCCGGCGGTGATGCGCGCTACGGTCGTATCGACAAGATCACCCCGAATGCGATGCGGGCCCGATTGCCGGGCGCGGCGCTCGGTGAGCAATGCCGCGTGGTCTCGCCGTCGCTCGACGCCGAGGTGATTGCGGTCGAGGGGCGGCATGTCTGGCTTGCGCCGTATGCCGAGCCGAACGGCGTGGCCAATGGCGCGCTGGTGCAGGCGCTGGGAAGGTCGTCGCGCGTGGCCGTCGGCGATCACCTGATTGGCGAGGTGCTCGATGGCCTCGGGCGGCCGTTGGTCCCCGCGACGGCGGCCGACGAGGCGCCGACGTCCGGCGTGGCATGGCGTTCACTGGACACGGAGCCGCCGCCCGCGATGACGCGTGCGCTGGTGTCCACGTGCCTGCCCATCGGCATTCGCGCGATCGACGGCATGCTCACCTGCGGTCGTGGCCAGCGATTGGGCATCTTTGCGGCGGCGGGGGGGGGCAAGAGCACGCTGCTGGCGATGATGTGCCAGGGTGCGCAGGCCGATGTGATCGTCGTGGCGCTGATCGGCGAGCGCGGGCGCGAGGTGCGCGAGTTTCTCGAGACGGCCCTCACCCCTGAGGCGCGTGCACGGACTGTCTGCGTCGTCGCGACATCCGATCGTCCCGCGCTCGAACGGATGAAGGCCGCCTACACCGCGACGGCCATTGCGGAGGCGTTTCGCGACGACGGCAAAGACGTGCTGTTGCTCATGGATTCCCTGACGCGCTTCGGGCGCGCCGTGCGCGATATCGGGATGGCGGCGGGAGAGCCGCTTGGCGCGACGAGCGGGTTGCCACCGAGCTTTTATGCGCGTCTGCCCCGGTTGCTGGAGCGCGCGGGGACCGGCGTGCGCGGCAGCATCACCGCGTTCTATACGGTGCTCGTCGAAGGCGACAACCTGGATGAGCCGCTCGCCGACGAGGTGCGTTCGATCGTCGACGGTCACATTGTGCTGTCGCGGCGTCTCGCGCAGGAAAATCACTATCCCGCCATCGACGTCGCGAGGAGCCTCTCGCGGGTGATGGCGGCGGTGACCGACGCGCCGCATGTCGATGCGGCGGCGCGTGTCAGGCGCGCGATGGCGCTGGCGGCGCAGGTTGAGTTGCTGGTACGCGTTGGCGAATATCAGCCGGGCAACGATCCGGAGACCGACGACGCGCTCGCGCGGGCCCCGGACATCCGTGCCTTTCTTTGTCAGGCGCAGCACGACGTGGCGCCATTCGACGACACGCGCGCATGGCTCGAACATCTCGCGAACTGA
PROTEIN sequence
Length: 455
MRRPDATRIANGLRRTLDARRKACDEWRRMSGGDARYGRIDKITPNAMRARLPGAALGEQCRVVSPSLDAEVIAVEGRHVWLAPYAEPNGVANGALVQALGRSSRVAVGDHLIGEVLDGLGRPLVPATAADEAPTSGVAWRSLDTEPPPAMTRALVSTCLPIGIRAIDGMLTCGRGQRLGIFAAAGGGKSTLLAMMCQGAQADVIVVALIGERGREVREFLETALTPEARARTVCVVATSDRPALERMKAAYTATAIAEAFRDDGKDVLLLMDSLTRFGRAVRDIGMAAGEPLGATSGLPPSFYARLPRLLERAGTGVRGSITAFYTVLVEGDNLDEPLADEVRSIVDGHIVLSRRLAQENHYPAIDVARSLSRVMAAVTDAPHVDAAARVRRAMALAAQVELLVRVGEYQPGNDPETDDALARAPDIRAFLCQAQHDVAPFDDTRAWLEHLAN*