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SCNpilot_cont_1000_bf_scaffold_58_curated_19

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18370..19389

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A6F1E similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 339.0
  • Bit_score: 681
  • Evalue 5.50e-193
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIU26543.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 339.0
  • Bit_score: 657
  • Evalue 9.10e-186
TRAP-type C4-dicarboxylate transport system periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 339.0
  • Bit_score: 517
  • Evalue 4.30e-144

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAGCAACATGGATCGCCGCCACTTCATCAAAGTCGTGGCCGCCACGTCGGCCGCCGCCGCCACGGGCTTGTATCAGACGCAAGCGCACGCTGCCGAATTCACGCTGAAGTTCGCCAACAATCTTCCCGTCAGCCACCCGATGAACGTTCGCGCCAAAGAGATGGCGCAAAAGATTGCGGAGCAGTCGAAAGGTCGCATCGACTTCCAGATTTACCCGAACAATCAATTGGGCAGCGACAGCGACATGCTGAGCCAGGTTCGCTCGGGCGCCATCGACTACTTCACGCTCTCGCCGCTGATTCTCGGCACGCTCGTGCCCTCGGCGCAGATCTCCGGCGTGGGCTTCGCGTTCAAGGACTACGGTCAGGTATGGGCCGCGATGGATGGCGACCTGGGCGCCCACGTACGCAGCCAGATCGCAAAGACCTCGGTGTTCGCCTTCGACAAGATCTGGGAAAACGGGTATCGCCAGATCACCACCAGCAGCCGCCCGATCAATTCGCCGGCCGACCTCAAGGGCCTGAAGATCCGCGTGCCGACGAGCCCGCTGTGGACGTCGATGTTCCGCGCCTTCGACGCCGCGCCCACGTCGATCAACTTCTCCGAAGTGTATTCGGCCCTGCAGACGCACATCGTCGAAGCCCAGGAAAATCCGCTGGCCATTCTGACCACGGCCAAGCTGTACGAAGTGCAGAAGTACGTGTCGATGACGAACCACATGTGGGACGGCTTCTGGTTCCTTGGCAACAAGCAGAAGTGGGACAAACTGCCGAAGGACCTGCAGGCGATCGTCACCGCCAACGTGAACGCCGCCGCGCTCGCGCAACGCGACGATGTGCGCAAGCTCAACGACAGCGTGACGACCGAACTCAAGCAGAAGGGCCTCGTGTTCAATGCACCGAACAACGAGCAGTTCCGCGACAAGCTTCGCGCCGCCGGATTCTATGCCGAATGGCACAAGAAGTTCGGCGATGAGGCGTGGTCGATGCTCGAAAAGTACACCGGGAAGCTTGCGTAA
PROTEIN sequence
Length: 340
MSNMDRRHFIKVVAATSAAAATGLYQTQAHAAEFTLKFANNLPVSHPMNVRAKEMAQKIAEQSKGRIDFQIYPNNQLGSDSDMLSQVRSGAIDYFTLSPLILGTLVPSAQISGVGFAFKDYGQVWAAMDGDLGAHVRSQIAKTSVFAFDKIWENGYRQITTSSRPINSPADLKGLKIRVPTSPLWTSMFRAFDAAPTSINFSEVYSALQTHIVEAQENPLAILTTAKLYEVQKYVSMTNHMWDGFWFLGNKQKWDKLPKDLQAIVTANVNAAALAQRDDVRKLNDSVTTELKQKGLVFNAPNNEQFRDKLRAAGFYAEWHKKFGDEAWSMLEKYTGKLA*