ggKbase home page

SCNpilot_cont_1000_bf_scaffold_17_curated_12

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 13488..14405

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346FA9C similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 592
  • Evalue 2.30e-166
LysR family transcriptional regulator {ECO:0000313|EMBL:EON13674.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 304.0
  • Bit_score: 573
  • Evalue 1.60e-160
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 301.0
  • Bit_score: 420
  • Evalue 4.90e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCAAACACACGCACTTCGCTACTTTCTCGAAGTCGCTCGTACCGGCTCGCTCAGTCGCGCCTCCGAGCGCCTGCACGTGGCGGTCTCTGCCTTGAGCCGACAGATCGCGAAGCTCGAGGAAGATCTCGGCACACCGTTGTTCGAGCGTCGTCCGCGCGGCATGGTGTTGAGTGAGGCAGGTGAGTTGCTTGCCGATCATGCGCGTCGCATGCTGCTCGATGCGGAACGCGTCACGTCGGAAATCCGGGGGCTGTCGGAAGTGGGGCGCGCGACGATTCGCGTCGCCAGTGCGGAGGGTGTCGCGCGGGATTTCCTGCCACAGGTCTTCGCACGCTTTCGCGAAACCTACCCTGGCGCGCACTTTCTGCTCGATGTTGTCTCGCCGTTCGTCGCCACGGAGCGCGTACGCGACGGCGAAGCGGATATCGCCGTGTGTTTCAGCGTCGCCCCGGAAAAAGGGGTGCAGGTCGTTCACACACAACCGGCGCCGATCTATGCCTTGATGGCCAAGCAGCACCCGCTCGCCAAACGACGCGACATCGCGCTTGCCGACTTGCTGCCTTACCCGATGGCGCTATCGAATGCCGGCGTGACCATCCGCCAGATGTTCGACCTGTGCTGCATTCTCGAAGGCCTGCTGTTCGAACCGGTGTTCGTGAGCAACTATCACGCCTCGCTGCACAGCTTCGTGCGCTCCGGCAACGCCGTCACACTGACCGGCCTGCTCACGGTGCGCAGCCGGCTCGATCCGGAAGGGCTCGTCGCCATCCCCATTCGAAATCCGGCGCTGCACCAACGCTCACTGCAAGTGCAGACAATGGCCGGACGCACCCTGCCCGCCCCCGTCGAAGCGTTTCTCGGCCTGCTGATCGACGCCATCCGCGCGCCCGAAATTCTCGACAAGCCATTCAGGTGA
PROTEIN sequence
Length: 306
MQTHALRYFLEVARTGSLSRASERLHVAVSALSRQIAKLEEDLGTPLFERRPRGMVLSEAGELLADHARRMLLDAERVTSEIRGLSEVGRATIRVASAEGVARDFLPQVFARFRETYPGAHFLLDVVSPFVATERVRDGEADIAVCFSVAPEKGVQVVHTQPAPIYALMAKQHPLAKRRDIALADLLPYPMALSNAGVTIRQMFDLCCILEGLLFEPVFVSNYHASLHSFVRSGNAVTLTGLLTVRSRLDPEGLVAIPIRNPALHQRSLQVQTMAGRTLPAPVEAFLGLLIDAIRAPEILDKPFR*