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SCNpilot_cont_1000_bf_scaffold_17_curated_20

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22740..24416)

Top 3 Functional Annotations

Value Algorithm Source
putative exported transglycosylase protein; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 548.0
  • Bit_score: 640
  • Evalue 5.60e-181
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A4B6C similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 558.0
  • Bit_score: 1089
  • Evalue 0.0
Lytic transglycosylase {ECO:0000313|EMBL:AJE97045.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 569.0
  • Bit_score: 990
  • Evalue 1.30e-285

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGCGACTTATCGTTAGCTTGCTACTGACGCTGCTTCTGGCGGCGTGTGCCGGCACAGCACCGACCAACGGTGCATTGAGTTCCACGCCGACTGCGCAAGGCCAATCGCCTCTCGCCACGACAGCCAAAGGCAAGCAACGCGTCTCAAGCGATCAGACCATTGACCTTGACAGCGACTCGATCAACGACCTGGCCTACGGCAGCGACGACGCCGACCTCTGGTCGCGCATTCGTCACGGTTTCGCGATCCCCGATCTGGACACCGACCTCGCGCAGGACCGCACGCAGTGGTACGCGCAGCGTCCCGAATACGTCGAGCGCATGATCGAGCGCTCGAGCAAATACCTGTTCCACATCGTTGAAGAACTCGAGCGCCGTCATATGCCGACGGAACTCGCGCTGCTGCCGTTCGTGGAAAGCGCGTATAACCCGCAGGCGCTCTCGACGGCGAAGGCGGCCGGCATGTGGCAGTTCATTCCCAGCACGGGCAAGACGTACAACCTCAAGCAGAACATGTTCCAGGACGAGCGCCGCGACGTGCTCGCCTCGACGACCGCAGCGCTCGACTACCTCTCGAAGCTCTATGCGATGTTCGGTGACTGGCAACTGGCGCTCGCGGCCTATAACTGGGGCGAAGGCAACGTGCAGCGTGCGATCGAGCGTAATCAGGCGCAAGGGTTGCCGACCGATTACCTGAGCCTGCGCATGCCGACCGAGACGCGTTACTACGTGCCGAAGCTGCAGGCGATCAAGAACATCATTGCGCACCCGGAAATCTACAGCGTGAAGCTGCCCGAGATTCCGAATCACCCGTACTTCGTCAGCGTGACCACCAAGCGCGACATCGACGTGGCATTGGCCGCGAAGCTGGCCGACCTGCCGCTCGACGAATTCCGCGCGCTCAATCCGTCGTTCCGCAAGCCGGTGATTCTTGGCGCGGCACAGCCGAAGATTCTCCTGCCGTTCGATAGCGCCGAAGTGTTTCAGCGTCGTCTGAAGGGTTATGACAAGCCGCTTTCGAGCTGGACGACCTACACGTCCGCATCGCGTGAGCGTCCGGAAGACGTCGCGCGCAAGCTGGGTGTCGACGCCGCGGTCATCCGTTCGGTCAATAACATTGCGCCGCGCATGCGCCTCAAGGCGGGCTCGACGTTGCTGGTGCCGCGCTCGGACGACATTGACCAGGACATCAGCGCGTCGGTAGCACGCAATGCCGTGCTTGCGCTGGAGCCGGATATTCCCGATACGCGCAAGGTGATGGTGCGCGCTCGCAAGCACGACACGCTTGCCCGCGTGGCCCAGCGCAGTGGCGTGAGCGTCGCACAGATCAAGAGCTGGAATCGTCTGCGTCGCGATACGCTCACGTCGGGCCAACTGCTGGTGCTTCACGTACCGGTCAAGGACGCCTTGCGCGTGGCGGCTGCGTCCGAGGCCCCGGCGGCCACGGGCGACGGCGAAGCGCCGCGTACGCGTCTGGTGCGCGGCAAGCATGGCAAGATGATCCGCGTGGTGGAGCGTCGGCCGGCCAAGGCTGCCGTCGCTGACAATAGGACCGCAACGGCCAAGGTGGCATCGAAGGGGCGGGCGAAGGCCCCTGCGAAGACAGTCGCCAAGATGGCTTCGAAGCCCACCGCCAAGAAGGCACCTGCGAAGGTGACCAAGACGGCACAACGCTGA
PROTEIN sequence
Length: 559
MRLIVSLLLTLLLAACAGTAPTNGALSSTPTAQGQSPLATTAKGKQRVSSDQTIDLDSDSINDLAYGSDDADLWSRIRHGFAIPDLDTDLAQDRTQWYAQRPEYVERMIERSSKYLFHIVEELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMFQDERRDVLASTTAALDYLSKLYAMFGDWQLALAAYNWGEGNVQRAIERNQAQGLPTDYLSLRMPTETRYYVPKLQAIKNIIAHPEIYSVKLPEIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRALNPSFRKPVILGAAQPKILLPFDSAEVFQRRLKGYDKPLSSWTTYTSASRERPEDVARKLGVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDQDISASVARNAVLALEPDIPDTRKVMVRARKHDTLARVAQRSGVSVAQIKSWNRLRRDTLTSGQLLVLHVPVKDALRVAAASEAPAATGDGEAPRTRLVRGKHGKMIRVVERRPAKAAVADNRTATAKVASKGRAKAPAKTVAKMASKPTAKKAPAKVTKTAQR*