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SCNpilot_cont_1000_bf_scaffold_17_curated_23

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 26284..26733

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 148.0
  • Bit_score: 310
  • Evalue 1.20e-81
rnhA; ribonuclease HI protein (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 143.0
  • Bit_score: 251
  • Evalue 1.90e-64
RNaseH ribonuclease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B9461 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 317
  • Evalue 7.00e-84

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Taxonomy

Pandoraea vervacti → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGACCTTGCCGCAAGTTGAGATTTACACCGACGGTGCCTGCAAAGGCAATCCTGGCCCCGGCGGCTGGGGCGCCCTGCTCGTCGCGGGCAAACACCGCAAGGAAATGTTCGGCGGCGAAGCCAACACGACCAACAACCGCATGGAGCTTCTGGCCGTCATTCGCGCGCTCGAAGCCCTGAACAAGCCCTGCAGCGTGGTGCTGCACACCGACTCGCAGTATGTGCAGAAAGGCATCAGCGAGTGGATTCACGGCTGGAAGGCCCGTGGCTGGAAAACCGCCGCCAAGGCGCCGGTGAAGAACGCCGACCTGTGGCAGACACTCGACGCCGTCTCGCAGAAACACGAGATCGACTGGCGTTGGGTGAAAGGTCATGCCGGCCACGACGGCAACGAAGCCGCCGACCAGTTGGCCAACCGAGGCGTTGAGAGCCTGCGTCGCGGCCAGTGA
PROTEIN sequence
Length: 150
MTLPQVEIYTDGACKGNPGPGGWGALLVAGKHRKEMFGGEANTTNNRMELLAVIRALEALNKPCSVVLHTDSQYVQKGISEWIHGWKARGWKTAAKAPVKNADLWQTLDAVSQKHEIDWRWVKGHAGHDGNEAADQLANRGVESLRRGQ*