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SCNpilot_cont_1000_bf_scaffold_17_curated_25

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 28521..30761

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase {ECO:0000313|EMBL:EON13655.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EON13655.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 746.0
  • Bit_score: 1440
  • Evalue 0.0
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 744.0
  • Bit_score: 1362
  • Evalue 0.0
isocitrate dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003495921 similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 746.0
  • Bit_score: 1483
  • Evalue 0.0

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2241
ATGAGTACGCAGCAACCCAGCATCATCTACACCCTGACCGACGAAGCACCGCTTCTGGCCACCAGCGCTTTCCTCCCGATCATTCGTACGTTCACGGCACCGGCGGGCGTGTCGGTCGAGACGAGCGACATCTCGGTCGCGGCTCGTATCCTCGGAGAATTCCCCGAATTTCTGACGGACGACCAGCGCGTGCCGGATAACCTCGCCGAGCTGGGCCGTCTGACGCAAGATCCGGATACGAACATCATCAAGCTGCCGAACATCAGCGCGTCGGTGTTCCAGCTCCAGAGCGCGATCAAGGAACTGCAATCGAAGGGCTACAAGGTGCCGGACTTTCCGGAAGACCCGAAGTCCGACGAAGAGAAAGCCATCCAGAAGCGTTACTCGAAGTGCCTCGGTTCGGCCGTCAACCCGGTGCTGCGCGAAGGCAACTCGGATCGTCGCGCCCCGCTCGCCGTCAAGAACTACGCCAAGAAGCACCCCCACAGCATGGGCGAGTGGAGCATGGCTTCGCGCACGCACGTGGCGCACATGAAGCATGGCGACTTCTACCACGGCGAAAAGTCGATGACGCTCGACCGTGCCCGTGACGTCAAGATGGAACTCGTCACCAAGAGCGGCAAGACGATCGTGCTCAAGCCGAAGGTCGCGCTGCTCGACGGCGAAATCATCGACAGCATGTTCATGAGCAAGAAGGCGCTGTGCGACTTCTATGAAGAGCAGATGGAAGACGCGCGCAAGACCGGCGTGATGCTCTCGCTGCACGTGAAGGCCACCATGATGAAGGTCTCGCACCCGATCGTGTTCGGCCACGCCGTGAAGATCTTCTACAAGGAAGCTTTCGAAAAGCACGGCAAGCTGTTCGACGAACTGGGCGTGAACGTCAACAACGGCCTCGTGAATCTGTACGAGAAGATCGAATCGCTGCCGAGCACGCAGCGTGAAGAGATCATCCGCGACCTGCATGCTTGCCACGAGCATCGCCCGGAACTGGCGATGGTCGACTCCGCCAAGGGTATTTCGAATCTGCACGCGCCGAACGACGTGATCGTCGACGCCTCGATGCCGGCCATGATCCGTATCGGCGGCAAGATGTGGGGTGCCGACGGCCGTCCGAAGGACACGAAGGCCGTGATCCCGGAGAGCACGTTCGCGCGCATCTATCAGGAAATCATCAACTTCTGCAAGACCAACGGCAACTTCGACCCGACTACCATGGGTACGGTGCCGAACGTCGGCCTGATGGCTCAGAAAGCGGAAGAGTACGGCTCACACGACAAGACCTTCGAAATCGCCGAAGACGGCGTGGCGAACATCGTCGACATCGCCACGGGCGAAGTGCTGCTCTCGCAGAACGTGGAAGCCGGCGACATCTGGCGTATGTGCCAGGTCAAGGACGCGCCGATCCGTGACTGGGTGAAGCTCGCCGTGAACCGCGTGCGCAATTCGGGCATGCCGGCCGTGTTCTGGCTCGACCCGTACCGCCCGCACGAAGCCGAGCTGATCAAGAAGGTTGAAACGTACCTGAAGGATTACGACACCAACGGTCTCGACATCCAGATCATGTCGCAAGTGCGCGCCATGCGTTACACGCTCGAGCGCGTGATTCGCGGTCTGGACACCATCTCGGTGACCGGCAACATTCTGCGCGACTACCTGACCGACCTGTTCCCGATCATGGAACTGGGCACCAGCGCCAAGATGCTGTCGATCGTGCCGCTGATGGCCGGTGGCGGCATGTACGAAACGGGTGCCGGCGGCTCGGCACCTAAGCACGTCAAGCAACTGGTGGAAGAGAACCACTTGCGCTGGGACTCGCTGGGTGAATTCCTGGCACTGGCAGTCTCGCTGGAAGACCTGGGCATCAAGACGGGCAACCAGCGCGCCAAGATCCTCGCCAAGACGCTCGATGCTGCCACCGGCAAGCTACTCGACAACAGCAAGGGTCCGTCGCCGAAGACCGGCCAGCTGGACAACCGCGGCAGCCAGTTCTATCTGGCGATGTACTGGGCGCAGGAATTGGCCGAGCAGAACGACGACGCCGATCTGGCCAAGCACTTCGTATCGCTCGCCAAGCAACTGACCGAGAACGAGAAGGCCATCGTGGGCGAATTCGCCGACGTGCAGGGTAAGCCGGCGGATATCGGCGGCTACTACAAGCCGGACTTCGAGAAGCTCGAGCAGGTCATGCGTCCGAGCAAGACGTTCAACGCTGCATTGGAAAGCGTCGCGAAGGCGTAA
PROTEIN sequence
Length: 747
MSTQQPSIIYTLTDEAPLLATSAFLPIIRTFTAPAGVSVETSDISVAARILGEFPEFLTDDQRVPDNLAELGRLTQDPDTNIIKLPNISASVFQLQSAIKELQSKGYKVPDFPEDPKSDEEKAIQKRYSKCLGSAVNPVLREGNSDRRAPLAVKNYAKKHPHSMGEWSMASRTHVAHMKHGDFYHGEKSMTLDRARDVKMELVTKSGKTIVLKPKVALLDGEIIDSMFMSKKALCDFYEEQMEDARKTGVMLSLHVKATMMKVSHPIVFGHAVKIFYKEAFEKHGKLFDELGVNVNNGLVNLYEKIESLPSTQREEIIRDLHACHEHRPELAMVDSAKGISNLHAPNDVIVDASMPAMIRIGGKMWGADGRPKDTKAVIPESTFARIYQEIINFCKTNGNFDPTTMGTVPNVGLMAQKAEEYGSHDKTFEIAEDGVANIVDIATGEVLLSQNVEAGDIWRMCQVKDAPIRDWVKLAVNRVRNSGMPAVFWLDPYRPHEAELIKKVETYLKDYDTNGLDIQIMSQVRAMRYTLERVIRGLDTISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVKQLVEENHLRWDSLGEFLALAVSLEDLGIKTGNQRAKILAKTLDAATGKLLDNSKGPSPKTGQLDNRGSQFYLAMYWAQELAEQNDDADLAKHFVSLAKQLTENEKAIVGEFADVQGKPADIGGYYKPDFEKLEQVMRPSKTFNAALESVAKA*