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SCNpilot_cont_1000_bf_scaffold_39_curated_5

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11460..12119

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003630645 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 435
  • Evalue 3.40e-119
TetR family transcriptional regulator {ECO:0000313|EMBL:KHQ97011.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 219.0
  • Bit_score: 407
  • Evalue 1.40e-110
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 213.0
  • Bit_score: 218
  • Evalue 2.10e-54

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACTCCGAACAAAGCCGTCTCGCAAGCTGAACCGCCCCGCAAACGCACACGTGGGCGTCCCACGTGCAACTGCTCGCATGGGGCCGACGCGTTGTTGCTTAACGCGCGGCGTATCTTTGCGCAGCGCGGTTTCTATGCGAGCAGCGTGCGGCAGATCGCGGAGGCGTCCGGGGTCGACGCCGCCCTGATCTCGCACCACTTCGGCTCGAAGGAGGCCCTGTGGATCGCGGTCGTCGATCAGATCGCGACGCTCACGCGCTCGATGATCGAGCAGACGCTGGCGCTGCGGCACGCGCCGCTGGAACCTGCCGAGCGTATCGAGCAGGCGGTACGAGGGTTCGTGGAAGTCGTCTTCGAGAATCCGGACATCGGTATGTTCTTCTCGACGGCCGCGACCGAGGAAGGTGAGCGGCTCGACATCATCATGCAGCGACTGGTGCGCCCGTATCGCGACGCGATGGTGCCGCTCGTGGCCGACTGGCTCGAAGCGCAGAAGCGCCCGGGGCAGGACGCCGACGTGATGTTTTTCATGCTGACGTCGGCCATCAGCAAGACAGTGTCGTATCGCCACATGATGGGACCGTTCCTGCCGCCCGAAGGCATGGCCGATCTCAAGCGCACCGTGCTCGACTGCGCGATGGCGCTGATTCGGCAGTGA
PROTEIN sequence
Length: 220
MTPNKAVSQAEPPRKRTRGRPTCNCSHGADALLLNARRIFAQRGFYASSVRQIAEASGVDAALISHHFGSKEALWIAVVDQIATLTRSMIEQTLALRHAPLEPAERIEQAVRGFVEVVFENPDIGMFFSTAATEEGERLDIIMQRLVRPYRDAMVPLVADWLEAQKRPGQDADVMFFMLTSAISKTVSYRHMMGPFLPPEGMADLKRTVLDCAMALIRQ*