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SCNpilot_cont_1000_bf_scaffold_39_curated_25

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(37523..38431)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003462DAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 302.0
  • Bit_score: 596
  • Evalue 2.10e-167
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ97035.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 302.0
  • Bit_score: 571
  • Evalue 1.00e-159
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 301.0
  • Bit_score: 397
  • Evalue 3.40e-108

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGGTCGACAGGACGTCAATCGCTCCGGCGATATGGAAGTTTTCTCGCGTGTGGTCGAGCTTGGCGGCTTCTCGGCGGCGGCGCGCGCGCTGCATATGACGCCGTCCGCCGTGAGCAAGCTGATTGCGCGGCTCGAGGCGCGTCTGGGTGCCCGCTTGTTCAATCGTTCGACGCGCCGCCTGCAACTCACCCCCGAGGGCACGGCCTTTCACGAGCGGGCGATGCGCGTGCTGGCCGACATCGAAGCCGCAGAGCGCGAAGCGGCGGCGGGTGCGGTGCCGCGCGGGCTGCTGCGGGTGAATTCCAGCGTACCGATCGGCTCGCACTATCTGCTGCCGGTCATTCCGGCATTTCTCGCGCAATACCCCGAGATCCGTCTCGATCTGACACTCACCGACACGGTCGTCGATCTGCTGGAGCAACGCGCCGACGTCGCCGTACGGGCCGGCCCGCTGCGCGATTCCCGGCTGGTCGCTCGCAAGCTCGGCGAGAGTCGTGTGCATGTGGTGGCGTCACCGGACTATCTCGCCCGCAACGGCCCATTGCGCACGCCGGCCGACCTGATTCACCACAACGTCATGGCCTTCAATTTCGACCGTCAGGTGCAGGGTTGGCCATTTCTCGACGGCGCCGGCGGCATCACGCACTACCCGCAGGTCGGCAATATGGTCGTGAGCGACGGCGAGATCATGCGCAAGCTCGCGGTCCAGGGGCTGGGGCTGGCCCGCCATTCGCGCTACCACGTCGACGACGATCTGCGCGCCGGCCGGCTCGTCACCGTGCTCGATGACTACAACCCGGGCGATCTGGAGCCCGTGCATGCGGTGTATGTGGGGCAGGGCGGCCATTTGCCCGCACGCGTGCGGGCGTTCCTCGACTTTCTCGTGGCGAACGTGCGTCTGCCGTAG
PROTEIN sequence
Length: 303
MGRQDVNRSGDMEVFSRVVELGGFSAAARALHMTPSAVSKLIARLEARLGARLFNRSTRRLQLTPEGTAFHERAMRVLADIEAAEREAAAGAVPRGLLRVNSSVPIGSHYLLPVIPAFLAQYPEIRLDLTLTDTVVDLLEQRADVAVRAGPLRDSRLVARKLGESRVHVVASPDYLARNGPLRTPADLIHHNVMAFNFDRQVQGWPFLDGAGGITHYPQVGNMVVSDGEIMRKLAVQGLGLARHSRYHVDDDLRAGRLVTVLDDYNPGDLEPVHAVYVGQGGHLPARVRAFLDFLVANVRLP*