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SCNpilot_cont_1000_p_scaffold_2387_curated_2

Organism: scnpilot_dereplicated_Pseudonocardia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(320..628)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F6Z3_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 3.00e-33
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63361.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 99.0
  • Bit_score: 149
  • Evalue 1.90e-33
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 9.30e-34

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGACGCCTTCTGGCTCCACGCGGAGACGGCGGCAGCGGGGCGAGGTCGAGACGCTGCCGAGCGGTTCGCTGCGCGTGCGGGTCTACGCGGGCATCGATCCGATCTCCGGTAAGCGGCACTACCTCACGGAGGTCATCCCGGCCGGCAAGGACGCGGCCAAGCTCGCGGAGAAGGCCCGTACCCGGATACAGAGCCAGGTCGACGAGCGCCGGAGCCCCCGCTCCAAGGTCACCGTGGATCAGCTCATGGACCGGCACCTGGACCTACTCGACGTCGACGTGACCACCCGGGCCGGCTACGAGGGGTAG
PROTEIN sequence
Length: 103
MTPSGSTRRRRQRGEVETLPSGSLRVRVYAGIDPISGKRHYLTEVIPAGKDAAKLAEKARTRIQSQVDERRSPRSKVTVDQLMDRHLDLLDVDVTTRAGYEG*