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SCNpilot_cont_1000_p_scaffold_467_curated_12

Organism: scnpilot_dereplicated_Pseudonocardia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(11754..12452)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037583D7 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 236.0
  • Bit_score: 304
  • Evalue 1.30e-79
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 233.0
  • Bit_score: 299
  • Evalue 7.40e-79
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB73535.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 233.0
  • Bit_score: 299
  • Evalue 3.30e-78

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGACCAGGCTGCTCATCGTGGAGGACGACGACATGATCGGCGGCGCACTGGCGGAGAGCCTGCGCGCCAACGGGCACGACGTGGTCTGGGCCCGCGCGGGCGCGCAGGCCCTGGACGAGGGGGGCTCGTTCGACCTGGTGCTGCTGGACCTCGGCCTCCCCGATCTCGACGGCGTGGAGGTGTGCCGCCGGCTGCGGCTGGCCCAGCCGGGCACCGTCATCGTGATCCTGACCGCGCGCAGCGAGGAGATGGACGTCGTCGTCGGGCTGGAGGCCGGCGCCGACGACTACCTCGTCAAGCCCGTTCGGCTCGCGGAGCTGCACGCGCGGCTGCGCGCCCACCTGCGCCGCGGCGCCCCCACCGCGCCCGAGCGGTCGCTGATCGGGGACCTCGTGGTCGACAGCGCGAGCCGGCGCGTCACCGTCGCCGGCCGGGAGGTGGTCCTGCGCTCCAAGGAGTTCGACCTGCTGGCCCGCCTGGCCGCCGAGCCGGGCAAGGCCGTGGGGCGGGAGACCCTCATGGCCGACGTCTGGGACGAGCACTGGTTCGGCTCCACCAAGACCCTCGACGTGCACATCGCCACGCTGCGCCGGCGGCTGCGCGAGCACGCCGACGCCGGCACCATCCCCGAGATCACCACGCTGCGCGGCCACGGGTACCGGCTCGAGGCCGGCCCGGAGATCCGCTCACAGCCGTGA
PROTEIN sequence
Length: 233
VTRLLIVEDDDMIGGALAESLRANGHDVVWARAGAQALDEGGSFDLVLLDLGLPDLDGVEVCRRLRLAQPGTVIVILTARSEEMDVVVGLEAGADDYLVKPVRLAELHARLRAHLRRGAPTAPERSLIGDLVVDSASRRVTVAGREVVLRSKEFDLLARLAAEPGKAVGRETLMADVWDEHWFGSTKTLDVHIATLRRRLREHADAGTIPEITTLRGHGYRLEAGPEIRSQP*