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SCNpilot_cont_1000_p_scaffold_188_curated_7

Organism: scnpilot_dereplicated_Pseudonocardia_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 7355..7873

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KD39_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 232
  • Evalue 3.40e-58
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CEL15756.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 236
  • Evalue 2.60e-59
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 168.0
  • Bit_score: 232
  • Evalue 1.10e-58

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGGACGACGCCTCGGAGCAGGAGTTCGCGGAGTACTTCCGCGCGCGCCGTGACGCCGTCCGTCGCACGGCCTACCTGCTGTGCGGCGACTGGCACCGCGCCGACGACCACGCCCAGGCCTCGTTCGTCGCGCTGCACCGGCACTGGGGCCGGATCCGTGAGCCCGGTGCCCGCGACGCGTGGATGCGCCGCACGCTGGCCCGTGCGGTGGTGGACGAGTCGCGGCGGCCGTGGCGGCGGGAGCGGTTCACGGCCGAGCCGATCGACGCCGCGGTGGTCGGGGCCGCGTCCGAGGGCGTCGCCACCCGGCACGTGCTGGTGGACGGGCTGCGGTCGGTGCCGCCCCGGCAACGGGCGGTGCTGGTGCTGCGCTACCTCGAGGGCCTCGACATCGCCGGCACCGCGGCGGCGCTGGGGTGTTCGGAGGGCACGGTGAAGAGCCAGACCTCGCACGGGCTGGCGGCCCTGCGGCTGGCGCTGGGTGACGCGTTGGACGATCTGGCGGAGGGAGTGGCATGA
PROTEIN sequence
Length: 173
VDDASEQEFAEYFRARRDAVRRTAYLLCGDWHRADDHAQASFVALHRHWGRIREPGARDAWMRRTLARAVVDESRRPWRRERFTAEPIDAAVVGAASEGVATRHVLVDGLRSVPPRQRAVLVLRYLEGLDIAGTAAALGCSEGTVKSQTSHGLAALRLALGDALDDLAEGVA*