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SCNpilot_cont_300_bf_scaffold_1353_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 11260..15462

Top 3 Functional Annotations

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Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 999.99
  • Bit_score: 2660
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 999.99
  • Bit_score: 2660
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RPOC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 999.99
  • Bit_score: 2660
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4203
ATGAACCAAGAAATTATGAATCTTTTCAATCCGACGACGCCGGCTCAGGTCTTCGACCAGATCCGGATTTCGATCGCTTCCCCGGAGAAGATTCTCTCGTGGTCCTACGGCGAGATCAAGAAGCCGGAGACCATCAATTACCGCACCTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGATTACGAGTGCTTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATCATCTGCGAGAAGTGCTCGGTCGAAGTGACCCTGTCGCGCGTCCGTCGCGAGCGCATGGGCCACATCGAGCTGGCAGCTCCGGTCGCGCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCATCGGCTTGCTGCTCGACATGACGCTGAAGGATCTCGAGCGCATCCTCTATTTCGAATACTACGTCGTGCTCGAGCCGGGTCTGACCGCGCTCAAGGACCGTCAGTTGCTGTCGGAAGAAGAGTATCTCCGCGCCCAGGACGAATACGGTCAGGACAGCTTCACCGCCATGATCGGCGCCGAAGCCATTCGCGAACTGCTCAAGGGTCTGGAGCTTGAAAAGCTCGAGGCGCAGCTGCGCGTCGACATGGCGGAGACCGACTCCGACATCAAGCACAAGAAGCTGGCCAAGCGCCTGAAGATCGTCGAGGCGTTCCGCTTCTCCGGCAACAAGCCGGAGTGGATGATCCTCACCGTGGTGCCGGTGATTCCGCCGGACCTGCGTCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCGACCTCGGACCTCAACGACCTGTATCGCCGCGTCATCAACCGCAACAACCGTTTGAAGCGGCTGATGGAGCTGCGCGCGCCGGACATCATCATCCGCAACGAAAAGCGCATGCTGCAGGAAGCTGTCGATGCGCTGTTCGACAACGGCCGCCGCGGCCGCGTCATCACCGGCGCCAACAAGCGTCCGCTGAAGTCGCTCGCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGTTCGGTGATCGTCGTCGGTCCCGAACTGAAGCTGCATCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAACTGTTCAAGCCGTTCATCTACTCGCGGCTCGACGCCAAGGGTCTCTCCACCACGGTGAAGCAGGCCAAGAAGCTGGTCGAGAAGGAGCGTCCGGAGGTTTGGGATATCCTCGATGAGGTGATCCGCGAACATCCCGTGCTGCTGAACCGCGCGCCGACGCTGCATCGCCTCGGCATTCAGGCGTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCTCGGCTTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTTCCGCTGTCGCTCGAAGCGCAGCTGGAAGCGCGCGTGCTGATGATGTCGACCAACAACATCCTGCATCCGGCCAACGGTCAGCCGATCATCGTTCCGTCGCAGGACATCGTGCTCGGCCTGTACTACCTGTCGATCATGCGCGAAGGCCTGCCCGGCGAGGGCAAGGTATTCGGCGACATGGCCGAACTGGAGCACGCGCTGCACTCCAAGGTCATCCACCTGCATACCAAGATCAAGTATCGCTGGGATGGCGTGGGCGAGGACGGCAAGCCGCTCAAGCGGATGATCGACACCACCGCGGGCCGCGTCATGCTCGGCCAGGTGCTGCCGAAGTCGCAGAAGATCAAGTTCGAGGCCATCAACAAGCTGATGACCAAGCGCGAGATCTCCGGCGTCATCGATCAGGTCTATCGTCACTGCGGTCAGAAGGAGACGGTGATCTTCTGCGACCGCATCATGGCGCTCGGCTTCTACAATGCGTTCAAGGCCGGCATCTCGTTCGGCAAGGACGACATGGTGGTGCCGCACGGCAAGTGGAAGATCGTCGATACCACGCGTACGCTGGCGAAGGACTTCGAGCAGCAGTACAACGACGGTCTCATCACCCACGGCGAGAAGTACAACAAGGTGGTCGACGCCTGGTCGAAGGCTACCGAAGAAATCGCCAAGGAGATGATGAAGGAAATCTCCGCCGTTAAGAAGAATCCGAAGGGCGGCGAAGCGCAGATCAACTCGATCTACATGATGGCTCACTCCGGTGCGCGTGGTTCGCCGGCGCAGATGCGTCAGCTTGCCGGTATGCGCGGCCTGATGGCCAAGCCGTCGGGTGAGATCATCGAGACGCCGATCATTTCCAACTTCAAGGAAGGTCTGTCGGTGCTCGAGTACTTCAACTCGACGCACGGTGCCCGCAAGGGTCTGGCCGACACCGCTCTGAAGACGGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTGGCGCAGGACTGCATCATCACGCAGGACGACTGCGGCACCAAGCTCGGCATCAAGATGCGCGCCATCGTCGATGCCGGCACGGTGGTGGCTTCGCTCGGCTCGCGCATCCTCGGCCGCACCGCGTGCGAGGACATCCGCGATCCGGCGACCAACAAGGTGGTGATCAAGCGCAACACCTTGATGGAAGAAAGCCATGTCGAGCAGATCGCACAGGCCAACATCCAGGAAGTGAAGATCCGTTCGGCTCTGACCTGCGAACTGGTCAACGGCATTTGCGGCAAGTGCTACGGCCGCGATCTGGCTCGCGGTACGCCGGTCAATCACGGTGAAGCTGTCGGCGTCATCGCCGCGCAGTCGATCGGTGAGCCCGGCACGCAGTTGACGATGCGTACGTTCCACATCGGCGGTGCGGCGCAGCTCAACGAACAGTCGGTGATCGAGTCGAACTTCGAAGGCAAGATCGTCATCAAGAACAAGGCGATCGCGCGTAACAGCGAGAACCATCTGGTCGCGATGGTCCGCAACATGGTTATCGCGGTGGTCGATCCCGATGGGACCGAGCGTGCAACGCACCGTATTCAATACGGCGCGCGCGTACACGTCGACGAAGGCGATATGGTCAAGCGCGGCCAGCGCATCGCGGAGTGGGATCCGTATACCCGTCCCATTCTCACCGAAGTCGAAGGCACCATCGGATTCGAGGATCTGGTCGAAGGACAATCGATTTCGGAAACGCTCGACGAGTCGACCGGTATCGCCAAGCGTGTCGTTATCGATTGGCGCTCCATGCGTGGCGGTGCGGATTTGCGTCCGGCCATCGTCATCAAGGGCAAGGATGGCAAGGTGCTGAAGCTGGCACGCGGCGGCGACGCCCGTTACATGCTCTCGGTCGATGCCATTCTGTCGGTCGACGTTGGAGCCAAGGTCAAGCCGGGCGACATTCTCGCGCGTATTTCGACCGAAAGCGCCAAGACGCGCGACATCACCGGCGGTCTGCCGCGTGTTGCCGAACTGTTCGAAGCGCGCAAGCCGAAGGATGCGGCGATCATCGCCGAAATCGCCGGCACCATCCGCTTCGGCCGCGACTACAAGAACAAGCGTCGCATCTCGATCGAGCCGGTCGACAAGAACGAGGAGACTCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGATGGCGACATCGTTGAAAAGGGTGACTTCATCGTTGAAGGCAACCCTGCACCGCACGACATTCTGGCGATCAAGGGCATCGAGGAACTCGCTGCCTATCTGGTCAACGAAATCCAGGAAGTCTACCGCTTGCAGGGCGTGCTGATTAACGACAAGCACATCGAAGTCATCGTTCGTCAGATGCTGCAGAAGGTCGAGATCACCGATCAGGGCGAGACCGACATGATCTCGGGCGAGCAGATCGACAAGATCGAGTTCGACGTGCTCAACGCCAAGGCGAAGGAAGAGGGCAAGAAGATCGCGACCGGAACGCCCGTGCTGCTCGGCATCACCAAGGCGAGCCTGCAGACGCGTTCGTTCTTCTCGGCGGCGTCGTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCCGTCAACGGCAAGGTGGACCCGCTGGAAGGCCTCAAGGAAAACGTCATTGTCGGCCGCCTGATTCCGGCCGGCACCGGCGCCTCGATGGCCCGCATCCGCGAAGTCGCCATGAAGCGCGACCGGCTGATTCTCGACGAGCGGGAAAAGCAGGCCGCGGCGATTACGCCGGCTGCACCGGAGGCCGAGCCGCTGGCCTTGCCGCCGGCGGAGTAA
PROTEIN sequence
Length: 1401
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEEEYLRAQDEYGQDSFTAMIGAEAIRELLKGLELEKLEAQLRVDMAETDSDIKHKKLAKRLKIVEAFRFSGNKPEWMILTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIMREGLPGEGKVFGDMAELEHALHSKVIHLHTKIKYRWDGVGEDGKPLKRMIDTTAGRVMLGQVLPKSQKIKFEAINKLMTKREISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHGKWKIVDTTRTLAKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKEMMKEISAVKKNPKGGEAQINSIYMMAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIITQDDCGTKLGIKMRAIVDAGTVVASLGSRILGRTACEDIRDPATNKVVIKRNTLMEESHVEQIAQANIQEVKIRSALTCELVNGICGKCYGRDLARGTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSVIESNFEGKIVIKNKAIARNSENHLVAMVRNMVIAVVDPDGTERATHRIQYGARVHVDEGDMVKRGQRIAEWDPYTRPILTEVEGTIGFEDLVEGQSISETLDESTGIAKRVVIDWRSMRGGADLRPAIVIKGKDGKVLKLARGGDARYMLSVDAILSVDVGAKVKPGDILARISTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKNEETREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQIDKIEFDVLNAKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMARIREVAMKRDRLILDEREKQAAAITPAAPEAEPLALPPAE*