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SCNpilot_cont_300_bf_scaffold_2236_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 4821..5366

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 181.0
  • Bit_score: 355
  • Evalue 3.70e-95
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50289.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 181.0
  • Bit_score: 355
  • Evalue 5.20e-95
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 181.0
  • Bit_score: 319
  • Evalue 7.10e-85

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAGCCGCGCTGGGCTTCTCCTCGCGACGACACTCGCCACGCTTGGCGTTGGCTATCCCGGCCTTACGCCGATGCCGATCAAGCTGATCTGGAACGCGTCGGCGAGCGCGCCGATCGGCCTCTATTCGATCGACTTCGACGGGCCGTTCGACGTCACCGATCTTGTCGCAGTCGATGCACCCGAACCGCTCGCGACCTTCCTCGCCGAGCGCGGCTATCTGCCCAAGGGCGTGCCGCTGATGAAGCGCATCCTCGCCGTCTCCGGGCAGACCGTTTGCCGCTCGAACCTCACCATCACGGTGGACGGTGTCGAGGTGGGCGCAGCGCTCGAACGTGATCGCGCCGGCCGCGATCTTCCCGTCTGGCAGGGCTGCCGCCGCGTCCAGACCGGCGAAGTCTTCCTCATGAACTGGCAGGTCCGCGACAGCCTCGACGGCCGCTACTTCGGCCTGGTCTCCACCGACCAGATCATCGGCCACGCCGTCCCGCTGTGGACCGACGAGGACGGCGCCGGCCGCTTCGCGTGGCGCGCACCGACACGTTGA
PROTEIN sequence
Length: 182
VSRAGLLLATTLATLGVGYPGLTPMPIKLIWNASASAPIGLYSIDFDGPFDVTDLVAVDAPEPLATFLAERGYLPKGVPLMKRILAVSGQTVCRSNLTITVDGVEVGAALERDRAGRDLPVWQGCRRVQTGEVFLMNWQVRDSLDGRYFGLVSTDQIIGHAVPLWTDEDGAGRFAWRAPTR*