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SCNpilot_cont_300_bf_scaffold_807_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_3

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38
Location: 2..646

Top 3 Functional Annotations

Value Algorithm Source
TRAG family protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGK5_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 214.0
  • Bit_score: 391
  • Evalue 5.50e-106
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 214.0
  • Bit_score: 391
  • Evalue 1.70e-106
TRAG family protein {ECO:0000313|EMBL:ACB81239.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 214.0
  • Bit_score: 391
  • Evalue 7.70e-106

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Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GCGAACAATTCGATCCTCGATAACTGCCATGTGCGCGTCAGCTTCGCCACGAACGACGAGCGCACGGCCAAGCGCGTGTCAGACGCGCTCGGCACCGCCACCGAGATGAAGGCGATGCGGAACTATGCGGGGCATCGGCTGTCACCCTGGCTCGGGCATCTGATGGTCTCCCGATCCGAGACGGCCCGCCAGTTGCTCACCCCCGGCGAGATCATGCAGCTCCCGCCGACCGACGAGATCGTCATGGTCGCGGGCACGCCGCCGATCCGAGCGAAGAAGGCGCGCTATTATGAGGATGCCCGCTTCAAGGAACGCATCCTGCCGCCGCCGGCGCTCGCGCAGCCGAAGCACGGCCGGCCTGACGATTGGACCGCGCTGCCGCTTCCGGCTCGGCCTGCGATCGCCGAGGCAAAGCCCGGGATGGAGACGGGCGACGAAGATCCGACCGGATCCGAGCGTCGCCAACAGCCCGAATTGAGCCGCATGAAGCCCGTCGAGAAGAAGGCGCCGATCGAGAACGAGTTCGAGATCGGCCTTGCCGATGACGCCGAGGATGACGCCACCCGCAATAGCCGGATGAACCGGCTGATGCAGGGTGTGGCGCGTCAGGTGTCGCTCGATCCCGGTGACGGCATGGAGCTTTAG
PROTEIN sequence
Length: 215
ANNSILDNCHVRVSFATNDERTAKRVSDALGTATEMKAMRNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPTDEIVMVAGTPPIRAKKARYYEDARFKERILPPPALAQPKHGRPDDWTALPLPARPAIAEAKPGMETGDEDPTGSERRQQPELSRMKPVEKKAPIENEFEIGLADDAEDDATRNSRMNRLMQGVARQVSLDPGDGMEL*